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Dynamic analysis of the microbial communities and metabolome of healthy banana rhizosphere soil during one growth cycle
BACKGROUND: The banana-growing rhizosphere soil ecosystem is very complex and consists of an entangled network of interactions between banana plants, microbes and soil, so identifying key components in banana production is difficult. Most of the previous studies on these interactions ignore the role...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9677880/ https://www.ncbi.nlm.nih.gov/pubmed/36420134 http://dx.doi.org/10.7717/peerj.14404 |
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author | Ye, Liujian Wang, Xiaohu Wei, Shengbo Zhu, Qixia He, Shuang Zhou, Liqin |
author_facet | Ye, Liujian Wang, Xiaohu Wei, Shengbo Zhu, Qixia He, Shuang Zhou, Liqin |
author_sort | Ye, Liujian |
collection | PubMed |
description | BACKGROUND: The banana-growing rhizosphere soil ecosystem is very complex and consists of an entangled network of interactions between banana plants, microbes and soil, so identifying key components in banana production is difficult. Most of the previous studies on these interactions ignore the role of the banana plant. At present, there is no research on the the micro-ecological environment of the banana planting growth cycle. METHODS: Based on high-throughput sequencing technology and metabolomics technology, this study analyzed the rhizosphere soil microbial community and metabolic dynamics of healthy banana plants during one growth cycle. RESULTS: Assessing the microbial community composition of healthy banana rhizosphere soil, we found that the bacteria with the highest levels were Proteobacteria, Chloroflexi, and Acidobacteria, and the dominant fungi were Ascomycota, Basidiomycota, and Mortierellomycota. The metabolite profile of healthy banana rhizosphere soil showed that sugars, lipids and organic acids were the most abundant, accounting for about 50% of the total metabolites. The correlation network between fungi and metabolites was more complex than that of bacteria and metabolites. In a soil environment with acidic pH, bacterial genera showed a significant negative correlation with pH value, while fungal genera showed no significant negative correlation with pH value. The network interactions between bacteria, between fungi, and between bacteria and fungi were all positively correlated. CONCLUSIONS: Healthy banana rhizosphere soil not only has a stable micro-ecology, but also has stable metabolic characteristics. The microorganisms in healthy banana rhizosphere soil have mutually beneficial rather than competitive relationships. |
format | Online Article Text |
id | pubmed-9677880 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-96778802022-11-22 Dynamic analysis of the microbial communities and metabolome of healthy banana rhizosphere soil during one growth cycle Ye, Liujian Wang, Xiaohu Wei, Shengbo Zhu, Qixia He, Shuang Zhou, Liqin PeerJ Agricultural Science BACKGROUND: The banana-growing rhizosphere soil ecosystem is very complex and consists of an entangled network of interactions between banana plants, microbes and soil, so identifying key components in banana production is difficult. Most of the previous studies on these interactions ignore the role of the banana plant. At present, there is no research on the the micro-ecological environment of the banana planting growth cycle. METHODS: Based on high-throughput sequencing technology and metabolomics technology, this study analyzed the rhizosphere soil microbial community and metabolic dynamics of healthy banana plants during one growth cycle. RESULTS: Assessing the microbial community composition of healthy banana rhizosphere soil, we found that the bacteria with the highest levels were Proteobacteria, Chloroflexi, and Acidobacteria, and the dominant fungi were Ascomycota, Basidiomycota, and Mortierellomycota. The metabolite profile of healthy banana rhizosphere soil showed that sugars, lipids and organic acids were the most abundant, accounting for about 50% of the total metabolites. The correlation network between fungi and metabolites was more complex than that of bacteria and metabolites. In a soil environment with acidic pH, bacterial genera showed a significant negative correlation with pH value, while fungal genera showed no significant negative correlation with pH value. The network interactions between bacteria, between fungi, and between bacteria and fungi were all positively correlated. CONCLUSIONS: Healthy banana rhizosphere soil not only has a stable micro-ecology, but also has stable metabolic characteristics. The microorganisms in healthy banana rhizosphere soil have mutually beneficial rather than competitive relationships. PeerJ Inc. 2022-11-18 /pmc/articles/PMC9677880/ /pubmed/36420134 http://dx.doi.org/10.7717/peerj.14404 Text en © 2022 Ye et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Agricultural Science Ye, Liujian Wang, Xiaohu Wei, Shengbo Zhu, Qixia He, Shuang Zhou, Liqin Dynamic analysis of the microbial communities and metabolome of healthy banana rhizosphere soil during one growth cycle |
title | Dynamic analysis of the microbial communities and metabolome of healthy banana rhizosphere soil during one growth cycle |
title_full | Dynamic analysis of the microbial communities and metabolome of healthy banana rhizosphere soil during one growth cycle |
title_fullStr | Dynamic analysis of the microbial communities and metabolome of healthy banana rhizosphere soil during one growth cycle |
title_full_unstemmed | Dynamic analysis of the microbial communities and metabolome of healthy banana rhizosphere soil during one growth cycle |
title_short | Dynamic analysis of the microbial communities and metabolome of healthy banana rhizosphere soil during one growth cycle |
title_sort | dynamic analysis of the microbial communities and metabolome of healthy banana rhizosphere soil during one growth cycle |
topic | Agricultural Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9677880/ https://www.ncbi.nlm.nih.gov/pubmed/36420134 http://dx.doi.org/10.7717/peerj.14404 |
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