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Developing an explainable machine learning model to predict the mechanical ventilation duration of patients with ARDS in intensive care units
BACKGROUND: Acute respiratory distress syndrome (ARDS) is common in intensive care units with high mortality rate and mechanical ventilation (MV) is the most important related treatment. Early prediction of MV duration has benefit for patients risk stratification and care strategies support. OBJECTI...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9678346/ https://www.ncbi.nlm.nih.gov/pubmed/36423504 http://dx.doi.org/10.1016/j.hrtlng.2022.11.005 |
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author | Wang, Zichen Zhang, Luming Huang, Tao Yang, Rui Cheng, Hongtao Wang, Hao Yin, Haiyan Lyu, Jun |
author_facet | Wang, Zichen Zhang, Luming Huang, Tao Yang, Rui Cheng, Hongtao Wang, Hao Yin, Haiyan Lyu, Jun |
author_sort | Wang, Zichen |
collection | PubMed |
description | BACKGROUND: Acute respiratory distress syndrome (ARDS) is common in intensive care units with high mortality rate and mechanical ventilation (MV) is the most important related treatment. Early prediction of MV duration has benefit for patients risk stratification and care strategies support. OBJECTIVE: To develop an explainable model for predicting mechanical ventilation (MV) duration in patients with ARDS using the machine learning (ML) approach. METHOD: The number of 1,148, 1,697, and 29 ARDS patients admitted to intensive care units (ICU) in the MIMIC-IV, eICU-CRD, and AmsterdamUMCdb databases were included in the study. Features at MV initiation from the MIMIC-IV dataset were used to train prediction models based on seven supervised machine learning algorithms. After 5-fold cross-validation for hyperparameters tuning, the hyperparameters- optimized model of different algorithms was tested by external datasets extracted from eICU-CRD and Amsterdamumcdb. Finally, three descriptive machine learning explanation methods were conducted for the model explanation. RESULT: The XGBoosting model showed the most stable and accurate performance among two testing datasets (RMSE= 5.57 and 5.46 days in eICU-CRD and AmsterdamUMCdb) and was selected as the optimal model. The model explanation based on SHAP, LIME, and DALEX results showed a consistent result, vasopressor, PH, and SOFA score had the highest effect on MV duration prediction. CONCLUSION: ML models with features at MV initiation can accurate predict MV duration in patients with ARDS in ICUs. Among seven algorithms, XGB models showed the best performance (RMSE= 5.57 and 5.46 in two external datasets). LIME, SHAP, and Breakdown methods showed good performance as AXI methods. |
format | Online Article Text |
id | pubmed-9678346 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-96783462022-11-22 Developing an explainable machine learning model to predict the mechanical ventilation duration of patients with ARDS in intensive care units Wang, Zichen Zhang, Luming Huang, Tao Yang, Rui Cheng, Hongtao Wang, Hao Yin, Haiyan Lyu, Jun Heart Lung Article BACKGROUND: Acute respiratory distress syndrome (ARDS) is common in intensive care units with high mortality rate and mechanical ventilation (MV) is the most important related treatment. Early prediction of MV duration has benefit for patients risk stratification and care strategies support. OBJECTIVE: To develop an explainable model for predicting mechanical ventilation (MV) duration in patients with ARDS using the machine learning (ML) approach. METHOD: The number of 1,148, 1,697, and 29 ARDS patients admitted to intensive care units (ICU) in the MIMIC-IV, eICU-CRD, and AmsterdamUMCdb databases were included in the study. Features at MV initiation from the MIMIC-IV dataset were used to train prediction models based on seven supervised machine learning algorithms. After 5-fold cross-validation for hyperparameters tuning, the hyperparameters- optimized model of different algorithms was tested by external datasets extracted from eICU-CRD and Amsterdamumcdb. Finally, three descriptive machine learning explanation methods were conducted for the model explanation. RESULT: The XGBoosting model showed the most stable and accurate performance among two testing datasets (RMSE= 5.57 and 5.46 days in eICU-CRD and AmsterdamUMCdb) and was selected as the optimal model. The model explanation based on SHAP, LIME, and DALEX results showed a consistent result, vasopressor, PH, and SOFA score had the highest effect on MV duration prediction. CONCLUSION: ML models with features at MV initiation can accurate predict MV duration in patients with ARDS in ICUs. Among seven algorithms, XGB models showed the best performance (RMSE= 5.57 and 5.46 in two external datasets). LIME, SHAP, and Breakdown methods showed good performance as AXI methods. Elsevier Inc. 2023 2022-11-21 /pmc/articles/PMC9678346/ /pubmed/36423504 http://dx.doi.org/10.1016/j.hrtlng.2022.11.005 Text en © 2022 Elsevier Inc. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Wang, Zichen Zhang, Luming Huang, Tao Yang, Rui Cheng, Hongtao Wang, Hao Yin, Haiyan Lyu, Jun Developing an explainable machine learning model to predict the mechanical ventilation duration of patients with ARDS in intensive care units |
title | Developing an explainable machine learning model to predict the mechanical ventilation duration of patients with ARDS in intensive care units |
title_full | Developing an explainable machine learning model to predict the mechanical ventilation duration of patients with ARDS in intensive care units |
title_fullStr | Developing an explainable machine learning model to predict the mechanical ventilation duration of patients with ARDS in intensive care units |
title_full_unstemmed | Developing an explainable machine learning model to predict the mechanical ventilation duration of patients with ARDS in intensive care units |
title_short | Developing an explainable machine learning model to predict the mechanical ventilation duration of patients with ARDS in intensive care units |
title_sort | developing an explainable machine learning model to predict the mechanical ventilation duration of patients with ards in intensive care units |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9678346/ https://www.ncbi.nlm.nih.gov/pubmed/36423504 http://dx.doi.org/10.1016/j.hrtlng.2022.11.005 |
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