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RNA-seq data of Aspergillus tubingensis NBRC 31125 in carbon catabolite repressor related to xylanase production

Aspergillus tubingensis NBRC 31125 is a prolific producer of endo-xylanase and β-xylosidase. However, the presence of glucose in the medium causes carbon catabolite repression (CCR) which inhibits the secretion of those enzymes. CCR in Aspergillus has been investigated in several ways. However, ther...

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Autores principales: Krisnawati, Ririn, Cahyanto, Muhammad Nur, Sardjono, Sadjono, Suroto, Dian Anggaraini, Widada, Jaka
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9679690/
https://www.ncbi.nlm.nih.gov/pubmed/36426064
http://dx.doi.org/10.1016/j.dib.2022.108700
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author Krisnawati, Ririn
Cahyanto, Muhammad Nur
Sardjono, Sadjono
Suroto, Dian Anggaraini
Widada, Jaka
author_facet Krisnawati, Ririn
Cahyanto, Muhammad Nur
Sardjono, Sadjono
Suroto, Dian Anggaraini
Widada, Jaka
author_sort Krisnawati, Ririn
collection PubMed
description Aspergillus tubingensis NBRC 31125 is a prolific producer of endo-xylanase and β-xylosidase. However, the presence of glucose in the medium causes carbon catabolite repression (CCR) which inhibits the secretion of those enzymes. CCR in Aspergillus has been investigated in several ways. However, there are currently not any molecular data are available regarding the CCR of A. tubingensis in the xylan and glucose medium. Therefore, this research focuses on this aspect. The RNA of the strain was extracted in repressive condition, followed by sequencing using the Illumina NextSeq550 platform and reference assembly. The RNA-seq raw reads were submitted to the NCBI website's Sequence Read Archive database under the accession numbers SRR15412365 and SRR15412366, respectively. The data provide information for differentiating the response of xylanase and other enzymes production with and without glucose addition. The transcriptomics data can also be used to understand the xylan metabolism and CCR in Aspergillus
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spelling pubmed-96796902022-11-23 RNA-seq data of Aspergillus tubingensis NBRC 31125 in carbon catabolite repressor related to xylanase production Krisnawati, Ririn Cahyanto, Muhammad Nur Sardjono, Sadjono Suroto, Dian Anggaraini Widada, Jaka Data Brief Data Article Aspergillus tubingensis NBRC 31125 is a prolific producer of endo-xylanase and β-xylosidase. However, the presence of glucose in the medium causes carbon catabolite repression (CCR) which inhibits the secretion of those enzymes. CCR in Aspergillus has been investigated in several ways. However, there are currently not any molecular data are available regarding the CCR of A. tubingensis in the xylan and glucose medium. Therefore, this research focuses on this aspect. The RNA of the strain was extracted in repressive condition, followed by sequencing using the Illumina NextSeq550 platform and reference assembly. The RNA-seq raw reads were submitted to the NCBI website's Sequence Read Archive database under the accession numbers SRR15412365 and SRR15412366, respectively. The data provide information for differentiating the response of xylanase and other enzymes production with and without glucose addition. The transcriptomics data can also be used to understand the xylan metabolism and CCR in Aspergillus Elsevier 2022-10-26 /pmc/articles/PMC9679690/ /pubmed/36426064 http://dx.doi.org/10.1016/j.dib.2022.108700 Text en © 2022 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Krisnawati, Ririn
Cahyanto, Muhammad Nur
Sardjono, Sadjono
Suroto, Dian Anggaraini
Widada, Jaka
RNA-seq data of Aspergillus tubingensis NBRC 31125 in carbon catabolite repressor related to xylanase production
title RNA-seq data of Aspergillus tubingensis NBRC 31125 in carbon catabolite repressor related to xylanase production
title_full RNA-seq data of Aspergillus tubingensis NBRC 31125 in carbon catabolite repressor related to xylanase production
title_fullStr RNA-seq data of Aspergillus tubingensis NBRC 31125 in carbon catabolite repressor related to xylanase production
title_full_unstemmed RNA-seq data of Aspergillus tubingensis NBRC 31125 in carbon catabolite repressor related to xylanase production
title_short RNA-seq data of Aspergillus tubingensis NBRC 31125 in carbon catabolite repressor related to xylanase production
title_sort rna-seq data of aspergillus tubingensis nbrc 31125 in carbon catabolite repressor related to xylanase production
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9679690/
https://www.ncbi.nlm.nih.gov/pubmed/36426064
http://dx.doi.org/10.1016/j.dib.2022.108700
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