Cargando…

Draft genome sequence data of Clostridium perfringens FA isolated from the faecal material of the critically endangered African wild dog, Lycaon pictus

In this present article the draft sequence data for Clostridium perfringens FA, which was isolated from the faecal material of a critically endangered African Wild dog, is reported. The bacterium is widely distributed in the environment and in the normal intestinal flora of humans and animals. The g...

Descripción completa

Detalles Bibliográficos
Autores principales: Sanchez, Fatima Aguilar, Brandt, Janelle, McLaughlin, Richard William
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9679721/
https://www.ncbi.nlm.nih.gov/pubmed/36425977
http://dx.doi.org/10.1016/j.dib.2022.108685
_version_ 1784834259556499456
author Sanchez, Fatima Aguilar
Brandt, Janelle
McLaughlin, Richard William
author_facet Sanchez, Fatima Aguilar
Brandt, Janelle
McLaughlin, Richard William
author_sort Sanchez, Fatima Aguilar
collection PubMed
description In this present article the draft sequence data for Clostridium perfringens FA, which was isolated from the faecal material of a critically endangered African Wild dog, is reported. The bacterium is widely distributed in the environment and in the normal intestinal flora of humans and animals. The genome of strain C. perfringens FA was assembled into 21 contigs with a total length of 3, 044, 349 bp and a GC content of 28.20%. There are 2742 CDS, 70 tRNAs and 5 rRNAs. Five putative virulence genes were detected. There were no plasmid replicons found. The genome of few environmental isolates has been sequenced. The draft genome of strain FA can be compared to disease causing isolates cultured from humans to aid in a better understanding of the pathogenesis of the bacterium.
format Online
Article
Text
id pubmed-9679721
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-96797212022-11-23 Draft genome sequence data of Clostridium perfringens FA isolated from the faecal material of the critically endangered African wild dog, Lycaon pictus Sanchez, Fatima Aguilar Brandt, Janelle McLaughlin, Richard William Data Brief Data Article In this present article the draft sequence data for Clostridium perfringens FA, which was isolated from the faecal material of a critically endangered African Wild dog, is reported. The bacterium is widely distributed in the environment and in the normal intestinal flora of humans and animals. The genome of strain C. perfringens FA was assembled into 21 contigs with a total length of 3, 044, 349 bp and a GC content of 28.20%. There are 2742 CDS, 70 tRNAs and 5 rRNAs. Five putative virulence genes were detected. There were no plasmid replicons found. The genome of few environmental isolates has been sequenced. The draft genome of strain FA can be compared to disease causing isolates cultured from humans to aid in a better understanding of the pathogenesis of the bacterium. Elsevier 2022-10-21 /pmc/articles/PMC9679721/ /pubmed/36425977 http://dx.doi.org/10.1016/j.dib.2022.108685 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Data Article
Sanchez, Fatima Aguilar
Brandt, Janelle
McLaughlin, Richard William
Draft genome sequence data of Clostridium perfringens FA isolated from the faecal material of the critically endangered African wild dog, Lycaon pictus
title Draft genome sequence data of Clostridium perfringens FA isolated from the faecal material of the critically endangered African wild dog, Lycaon pictus
title_full Draft genome sequence data of Clostridium perfringens FA isolated from the faecal material of the critically endangered African wild dog, Lycaon pictus
title_fullStr Draft genome sequence data of Clostridium perfringens FA isolated from the faecal material of the critically endangered African wild dog, Lycaon pictus
title_full_unstemmed Draft genome sequence data of Clostridium perfringens FA isolated from the faecal material of the critically endangered African wild dog, Lycaon pictus
title_short Draft genome sequence data of Clostridium perfringens FA isolated from the faecal material of the critically endangered African wild dog, Lycaon pictus
title_sort draft genome sequence data of clostridium perfringens fa isolated from the faecal material of the critically endangered african wild dog, lycaon pictus
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9679721/
https://www.ncbi.nlm.nih.gov/pubmed/36425977
http://dx.doi.org/10.1016/j.dib.2022.108685
work_keys_str_mv AT sanchezfatimaaguilar draftgenomesequencedataofclostridiumperfringensfaisolatedfromthefaecalmaterialofthecriticallyendangeredafricanwilddoglycaonpictus
AT brandtjanelle draftgenomesequencedataofclostridiumperfringensfaisolatedfromthefaecalmaterialofthecriticallyendangeredafricanwilddoglycaonpictus
AT mclaughlinrichardwilliam draftgenomesequencedataofclostridiumperfringensfaisolatedfromthefaecalmaterialofthecriticallyendangeredafricanwilddoglycaonpictus