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A transcriptomic (RNA-seq) analysis of Drosophila melanogaster adult testes overexpressing microRNA-2b-1

MicroRNAs (miRNAs) are short non-coding single-stranded RNAs with approximately 22 nucleotides in length that negatively regulate the mRNA translation of a target gene. MiR-2b-1 belongs to the largest miR-2 family in Drosophila melanogaster with 8 members and this miRNA family is conserved in invert...

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Autores principales: Manickam, Sharvin, Thangadurai, Shallinie, Azlan, Azali, Amin, Zarina, Azzam, Ghows, Halim, Mardani Abdul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9679752/
https://www.ncbi.nlm.nih.gov/pubmed/36426000
http://dx.doi.org/10.1016/j.dib.2022.108748
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author Manickam, Sharvin
Thangadurai, Shallinie
Azlan, Azali
Amin, Zarina
Azzam, Ghows
Halim, Mardani Abdul
author_facet Manickam, Sharvin
Thangadurai, Shallinie
Azlan, Azali
Amin, Zarina
Azzam, Ghows
Halim, Mardani Abdul
author_sort Manickam, Sharvin
collection PubMed
description MicroRNAs (miRNAs) are short non-coding single-stranded RNAs with approximately 22 nucleotides in length that negatively regulate the mRNA translation of a target gene. MiR-2b-1 belongs to the largest miR-2 family in Drosophila melanogaster with 8 members and this miRNA family is conserved in invertebrates. miRNAs play key roles in gene regulation, cell proliferation, cell death, cell differentiation and cell developmental homeostasis in multicellular organisms. Its role in various human diseases is continuously being studied. miRNAs also found out to be crucial in maintaining stem cell niche in D. melanogaster gonads. We have identified that ectopic overexpression of miR-2b-1 of D. melanogaster causes testicular bulging (a tumour like phenotype) in 3-5 days old adult flies. Hence, we have performed a transcriptomic (RNA-seq) analysis to understand the role of miR-2b-1 in the development, maintenance, and differentiation of D. melanogaster adult testis stem cells. Data are available from GEO (accession number GSE211399).
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spelling pubmed-96797522022-11-23 A transcriptomic (RNA-seq) analysis of Drosophila melanogaster adult testes overexpressing microRNA-2b-1 Manickam, Sharvin Thangadurai, Shallinie Azlan, Azali Amin, Zarina Azzam, Ghows Halim, Mardani Abdul Data Brief Data Article MicroRNAs (miRNAs) are short non-coding single-stranded RNAs with approximately 22 nucleotides in length that negatively regulate the mRNA translation of a target gene. MiR-2b-1 belongs to the largest miR-2 family in Drosophila melanogaster with 8 members and this miRNA family is conserved in invertebrates. miRNAs play key roles in gene regulation, cell proliferation, cell death, cell differentiation and cell developmental homeostasis in multicellular organisms. Its role in various human diseases is continuously being studied. miRNAs also found out to be crucial in maintaining stem cell niche in D. melanogaster gonads. We have identified that ectopic overexpression of miR-2b-1 of D. melanogaster causes testicular bulging (a tumour like phenotype) in 3-5 days old adult flies. Hence, we have performed a transcriptomic (RNA-seq) analysis to understand the role of miR-2b-1 in the development, maintenance, and differentiation of D. melanogaster adult testis stem cells. Data are available from GEO (accession number GSE211399). Elsevier 2022-11-13 /pmc/articles/PMC9679752/ /pubmed/36426000 http://dx.doi.org/10.1016/j.dib.2022.108748 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Manickam, Sharvin
Thangadurai, Shallinie
Azlan, Azali
Amin, Zarina
Azzam, Ghows
Halim, Mardani Abdul
A transcriptomic (RNA-seq) analysis of Drosophila melanogaster adult testes overexpressing microRNA-2b-1
title A transcriptomic (RNA-seq) analysis of Drosophila melanogaster adult testes overexpressing microRNA-2b-1
title_full A transcriptomic (RNA-seq) analysis of Drosophila melanogaster adult testes overexpressing microRNA-2b-1
title_fullStr A transcriptomic (RNA-seq) analysis of Drosophila melanogaster adult testes overexpressing microRNA-2b-1
title_full_unstemmed A transcriptomic (RNA-seq) analysis of Drosophila melanogaster adult testes overexpressing microRNA-2b-1
title_short A transcriptomic (RNA-seq) analysis of Drosophila melanogaster adult testes overexpressing microRNA-2b-1
title_sort transcriptomic (rna-seq) analysis of drosophila melanogaster adult testes overexpressing microrna-2b-1
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9679752/
https://www.ncbi.nlm.nih.gov/pubmed/36426000
http://dx.doi.org/10.1016/j.dib.2022.108748
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