Cargando…

Temperature-dependent elastic properties of DNA

Knowledge of the elastic properties, e.g., the persistence length or interphosphate distance, of single-stranded (ss) and double-stranded (ds) DNA under different experimental conditions is critical to characterizing molecular reactions studied with single-molecule techniques. While previous experim...

Descripción completa

Detalles Bibliográficos
Autores principales: Rico-Pasto, Marc, Ritort, Felix
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9680767/
https://www.ncbi.nlm.nih.gov/pubmed/36425333
http://dx.doi.org/10.1016/j.bpr.2022.100067
_version_ 1784834484206567424
author Rico-Pasto, Marc
Ritort, Felix
author_facet Rico-Pasto, Marc
Ritort, Felix
author_sort Rico-Pasto, Marc
collection PubMed
description Knowledge of the elastic properties, e.g., the persistence length or interphosphate distance, of single-stranded (ss) and double-stranded (ds) DNA under different experimental conditions is critical to characterizing molecular reactions studied with single-molecule techniques. While previous experiments have addressed the dependence of the elastic parameters upon varying ionic strength and contour length, temperature-dependent effects are less studied. Here, we examine the temperature-dependent elasticity of ssDNA and dsDNA in the range 5°C–50°C using a temperature-jump optical trap. We find a temperature softening for dsDNA and a temperature stiffening for ssDNA. Our results highlight the need for a general theory explaining the phenomenology observed.
format Online
Article
Text
id pubmed-9680767
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-96807672022-11-23 Temperature-dependent elastic properties of DNA Rico-Pasto, Marc Ritort, Felix Biophys Rep (N Y) Report Knowledge of the elastic properties, e.g., the persistence length or interphosphate distance, of single-stranded (ss) and double-stranded (ds) DNA under different experimental conditions is critical to characterizing molecular reactions studied with single-molecule techniques. While previous experiments have addressed the dependence of the elastic parameters upon varying ionic strength and contour length, temperature-dependent effects are less studied. Here, we examine the temperature-dependent elasticity of ssDNA and dsDNA in the range 5°C–50°C using a temperature-jump optical trap. We find a temperature softening for dsDNA and a temperature stiffening for ssDNA. Our results highlight the need for a general theory explaining the phenomenology observed. Elsevier 2022-08-05 /pmc/articles/PMC9680767/ /pubmed/36425333 http://dx.doi.org/10.1016/j.bpr.2022.100067 Text en © 2022. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Report
Rico-Pasto, Marc
Ritort, Felix
Temperature-dependent elastic properties of DNA
title Temperature-dependent elastic properties of DNA
title_full Temperature-dependent elastic properties of DNA
title_fullStr Temperature-dependent elastic properties of DNA
title_full_unstemmed Temperature-dependent elastic properties of DNA
title_short Temperature-dependent elastic properties of DNA
title_sort temperature-dependent elastic properties of dna
topic Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9680767/
https://www.ncbi.nlm.nih.gov/pubmed/36425333
http://dx.doi.org/10.1016/j.bpr.2022.100067
work_keys_str_mv AT ricopastomarc temperaturedependentelasticpropertiesofdna
AT ritortfelix temperaturedependentelasticpropertiesofdna