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Temperature-dependent elastic properties of DNA
Knowledge of the elastic properties, e.g., the persistence length or interphosphate distance, of single-stranded (ss) and double-stranded (ds) DNA under different experimental conditions is critical to characterizing molecular reactions studied with single-molecule techniques. While previous experim...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9680767/ https://www.ncbi.nlm.nih.gov/pubmed/36425333 http://dx.doi.org/10.1016/j.bpr.2022.100067 |
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author | Rico-Pasto, Marc Ritort, Felix |
author_facet | Rico-Pasto, Marc Ritort, Felix |
author_sort | Rico-Pasto, Marc |
collection | PubMed |
description | Knowledge of the elastic properties, e.g., the persistence length or interphosphate distance, of single-stranded (ss) and double-stranded (ds) DNA under different experimental conditions is critical to characterizing molecular reactions studied with single-molecule techniques. While previous experiments have addressed the dependence of the elastic parameters upon varying ionic strength and contour length, temperature-dependent effects are less studied. Here, we examine the temperature-dependent elasticity of ssDNA and dsDNA in the range 5°C–50°C using a temperature-jump optical trap. We find a temperature softening for dsDNA and a temperature stiffening for ssDNA. Our results highlight the need for a general theory explaining the phenomenology observed. |
format | Online Article Text |
id | pubmed-9680767 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-96807672022-11-23 Temperature-dependent elastic properties of DNA Rico-Pasto, Marc Ritort, Felix Biophys Rep (N Y) Report Knowledge of the elastic properties, e.g., the persistence length or interphosphate distance, of single-stranded (ss) and double-stranded (ds) DNA under different experimental conditions is critical to characterizing molecular reactions studied with single-molecule techniques. While previous experiments have addressed the dependence of the elastic parameters upon varying ionic strength and contour length, temperature-dependent effects are less studied. Here, we examine the temperature-dependent elasticity of ssDNA and dsDNA in the range 5°C–50°C using a temperature-jump optical trap. We find a temperature softening for dsDNA and a temperature stiffening for ssDNA. Our results highlight the need for a general theory explaining the phenomenology observed. Elsevier 2022-08-05 /pmc/articles/PMC9680767/ /pubmed/36425333 http://dx.doi.org/10.1016/j.bpr.2022.100067 Text en © 2022. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Report Rico-Pasto, Marc Ritort, Felix Temperature-dependent elastic properties of DNA |
title | Temperature-dependent elastic properties of DNA |
title_full | Temperature-dependent elastic properties of DNA |
title_fullStr | Temperature-dependent elastic properties of DNA |
title_full_unstemmed | Temperature-dependent elastic properties of DNA |
title_short | Temperature-dependent elastic properties of DNA |
title_sort | temperature-dependent elastic properties of dna |
topic | Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9680767/ https://www.ncbi.nlm.nih.gov/pubmed/36425333 http://dx.doi.org/10.1016/j.bpr.2022.100067 |
work_keys_str_mv | AT ricopastomarc temperaturedependentelasticpropertiesofdna AT ritortfelix temperaturedependentelasticpropertiesofdna |