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Elevational changes in the bacterial community composition and potential functions in a Tibetan grassland

In the Tibetan grasslands, the distribution patterns of the microbial community structure and function along elevation gradients have attracted considerable attention due to the wide distribution of mountain slopes, but the controlling factors of these patterns are still unclear. Here we investigate...

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Autores principales: Li, Yaoming, Fang, Zhen, Yang, Fan, Ji, Baoming, Li, Xiangzhen, Wang, Shiping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9684203/
https://www.ncbi.nlm.nih.gov/pubmed/36439816
http://dx.doi.org/10.3389/fmicb.2022.1028838
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author Li, Yaoming
Fang, Zhen
Yang, Fan
Ji, Baoming
Li, Xiangzhen
Wang, Shiping
author_facet Li, Yaoming
Fang, Zhen
Yang, Fan
Ji, Baoming
Li, Xiangzhen
Wang, Shiping
author_sort Li, Yaoming
collection PubMed
description In the Tibetan grasslands, the distribution patterns of the microbial community structure and function along elevation gradients have attracted considerable attention due to the wide distribution of mountain slopes, but the controlling factors of these patterns are still unclear. Here we investigated the taxonomy and potential functions of soil bacteria along an elevation gradient in a Tibetan mountainous grassland in 2 years, aiming to explore the elevation patterns of the bacterial structure and function and the underlying drivers. High-throughput sequencing and environment attribute measurements were conducted to survey the bacterial and environment characters. Furthermore, PICRUSt2 for prediction of bacterial functions, iCAMP for unraveling the drivers controlling community assembly, and HMSC for variance partitioning of bacterial community composition were used. Elevation did not significantly affect the bacterial diversity but changed their composition, driven by both deterministic and stochastic processes. In addition, elevation did not significantly affect the relative importance of deterministic and stochastic processes. Soil carbon, nitrogen, and temperature were important deterministic factors in driving bacterial community structure. The genus Solirubrobacter in Actinobacteriota was identified as most elevation discriminatory. Based on these observations, the bacterial community in the Tibetan mountainous grasslands was more controlled by edaphic factors than temperature, indicating their relative stability under climate change scenarios.
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spelling pubmed-96842032022-11-25 Elevational changes in the bacterial community composition and potential functions in a Tibetan grassland Li, Yaoming Fang, Zhen Yang, Fan Ji, Baoming Li, Xiangzhen Wang, Shiping Front Microbiol Microbiology In the Tibetan grasslands, the distribution patterns of the microbial community structure and function along elevation gradients have attracted considerable attention due to the wide distribution of mountain slopes, but the controlling factors of these patterns are still unclear. Here we investigated the taxonomy and potential functions of soil bacteria along an elevation gradient in a Tibetan mountainous grassland in 2 years, aiming to explore the elevation patterns of the bacterial structure and function and the underlying drivers. High-throughput sequencing and environment attribute measurements were conducted to survey the bacterial and environment characters. Furthermore, PICRUSt2 for prediction of bacterial functions, iCAMP for unraveling the drivers controlling community assembly, and HMSC for variance partitioning of bacterial community composition were used. Elevation did not significantly affect the bacterial diversity but changed their composition, driven by both deterministic and stochastic processes. In addition, elevation did not significantly affect the relative importance of deterministic and stochastic processes. Soil carbon, nitrogen, and temperature were important deterministic factors in driving bacterial community structure. The genus Solirubrobacter in Actinobacteriota was identified as most elevation discriminatory. Based on these observations, the bacterial community in the Tibetan mountainous grasslands was more controlled by edaphic factors than temperature, indicating their relative stability under climate change scenarios. Frontiers Media S.A. 2022-11-10 /pmc/articles/PMC9684203/ /pubmed/36439816 http://dx.doi.org/10.3389/fmicb.2022.1028838 Text en Copyright © 2022 Li, Fang, Yang, Ji, Li and Wang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Li, Yaoming
Fang, Zhen
Yang, Fan
Ji, Baoming
Li, Xiangzhen
Wang, Shiping
Elevational changes in the bacterial community composition and potential functions in a Tibetan grassland
title Elevational changes in the bacterial community composition and potential functions in a Tibetan grassland
title_full Elevational changes in the bacterial community composition and potential functions in a Tibetan grassland
title_fullStr Elevational changes in the bacterial community composition and potential functions in a Tibetan grassland
title_full_unstemmed Elevational changes in the bacterial community composition and potential functions in a Tibetan grassland
title_short Elevational changes in the bacterial community composition and potential functions in a Tibetan grassland
title_sort elevational changes in the bacterial community composition and potential functions in a tibetan grassland
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9684203/
https://www.ncbi.nlm.nih.gov/pubmed/36439816
http://dx.doi.org/10.3389/fmicb.2022.1028838
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