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Comprehensive genomic profiling of colorectal cancer patients reveals differences in mutational landscapes among clinical and pathological subgroups

With the widespread of colonoscopy, colorectal cancer remains to be one of the most detrimental types of cancer. Though there were multiple studies investigating the genomic landscape of colorectal cancer, a comprehensive analysis uncovering the differences between various types of colorectal cancer...

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Autores principales: Li, Peng, Meng, Qingyu, Xue, Yonggan, Teng, Zhipeng, Chen, Hanlin, Zhang, Junli, Xu, Yang, Wang, Sha, Yu, Ruoying, Ou, Qiuxiang, Wu, Xue, Jia, Baoqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9685809/
https://www.ncbi.nlm.nih.gov/pubmed/36439454
http://dx.doi.org/10.3389/fonc.2022.1000146
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author Li, Peng
Meng, Qingyu
Xue, Yonggan
Teng, Zhipeng
Chen, Hanlin
Zhang, Junli
Xu, Yang
Wang, Sha
Yu, Ruoying
Ou, Qiuxiang
Wu, Xue
Jia, Baoqing
author_facet Li, Peng
Meng, Qingyu
Xue, Yonggan
Teng, Zhipeng
Chen, Hanlin
Zhang, Junli
Xu, Yang
Wang, Sha
Yu, Ruoying
Ou, Qiuxiang
Wu, Xue
Jia, Baoqing
author_sort Li, Peng
collection PubMed
description With the widespread of colonoscopy, colorectal cancer remains to be one of the most detrimental types of cancer. Though there were multiple studies investigating the genomic landscape of colorectal cancer, a comprehensive analysis uncovering the differences between various types of colorectal cancer is still lacking. In our study, we performed genomic analysis on 133 patients with colorectal cancer. Mutated FAT1 and PKHD1 and altered Hippo pathway genes were found to be enriched in early-onset colorectal cancer. APOBEC signature was prevalent in microsatellite stable (MSS) patients and was related to lymph node metastasis. ZNF217 mutations were significantly associated with early-stage colorectal cancer. In all, this study represents a comprehensive genomic analysis uncovering potential molecular mechanisms underneath different subgroups of colorectal cancer thus providing new targets for precision treatment development.
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spelling pubmed-96858092022-11-25 Comprehensive genomic profiling of colorectal cancer patients reveals differences in mutational landscapes among clinical and pathological subgroups Li, Peng Meng, Qingyu Xue, Yonggan Teng, Zhipeng Chen, Hanlin Zhang, Junli Xu, Yang Wang, Sha Yu, Ruoying Ou, Qiuxiang Wu, Xue Jia, Baoqing Front Oncol Oncology With the widespread of colonoscopy, colorectal cancer remains to be one of the most detrimental types of cancer. Though there were multiple studies investigating the genomic landscape of colorectal cancer, a comprehensive analysis uncovering the differences between various types of colorectal cancer is still lacking. In our study, we performed genomic analysis on 133 patients with colorectal cancer. Mutated FAT1 and PKHD1 and altered Hippo pathway genes were found to be enriched in early-onset colorectal cancer. APOBEC signature was prevalent in microsatellite stable (MSS) patients and was related to lymph node metastasis. ZNF217 mutations were significantly associated with early-stage colorectal cancer. In all, this study represents a comprehensive genomic analysis uncovering potential molecular mechanisms underneath different subgroups of colorectal cancer thus providing new targets for precision treatment development. Frontiers Media S.A. 2022-11-10 /pmc/articles/PMC9685809/ /pubmed/36439454 http://dx.doi.org/10.3389/fonc.2022.1000146 Text en Copyright © 2022 Li, Meng, Xue, Teng, Chen, Zhang, Xu, Wang, Yu, Ou, Wu and Jia https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Li, Peng
Meng, Qingyu
Xue, Yonggan
Teng, Zhipeng
Chen, Hanlin
Zhang, Junli
Xu, Yang
Wang, Sha
Yu, Ruoying
Ou, Qiuxiang
Wu, Xue
Jia, Baoqing
Comprehensive genomic profiling of colorectal cancer patients reveals differences in mutational landscapes among clinical and pathological subgroups
title Comprehensive genomic profiling of colorectal cancer patients reveals differences in mutational landscapes among clinical and pathological subgroups
title_full Comprehensive genomic profiling of colorectal cancer patients reveals differences in mutational landscapes among clinical and pathological subgroups
title_fullStr Comprehensive genomic profiling of colorectal cancer patients reveals differences in mutational landscapes among clinical and pathological subgroups
title_full_unstemmed Comprehensive genomic profiling of colorectal cancer patients reveals differences in mutational landscapes among clinical and pathological subgroups
title_short Comprehensive genomic profiling of colorectal cancer patients reveals differences in mutational landscapes among clinical and pathological subgroups
title_sort comprehensive genomic profiling of colorectal cancer patients reveals differences in mutational landscapes among clinical and pathological subgroups
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9685809/
https://www.ncbi.nlm.nih.gov/pubmed/36439454
http://dx.doi.org/10.3389/fonc.2022.1000146
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