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Sex-related differences in single nucleotide polymorphisms associated with dyslipidemia in a Korean population

BACKGROUND: The prevalence of dyslipidemia has increased steadily in Korea, and the incidence of dyslipidemia differs by sex. In this study, we identified single nucleotide polymorphisms (SNPs) related to dyslipidemia in Korean cohorts through genome-wide association study (GWAS) analysis. METHODS:...

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Autores principales: Lee, Gyeonghee, Jeon, Hye Kyung, Yoo, Hae Young
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9685854/
https://www.ncbi.nlm.nih.gov/pubmed/36419087
http://dx.doi.org/10.1186/s12944-022-01736-5
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author Lee, Gyeonghee
Jeon, Hye Kyung
Yoo, Hae Young
author_facet Lee, Gyeonghee
Jeon, Hye Kyung
Yoo, Hae Young
author_sort Lee, Gyeonghee
collection PubMed
description BACKGROUND: The prevalence of dyslipidemia has increased steadily in Korea, and the incidence of dyslipidemia differs by sex. In this study, we identified single nucleotide polymorphisms (SNPs) related to dyslipidemia in Korean cohorts through genome-wide association study (GWAS) analysis. METHODS: Genotyping was conducted to determine the genotypes of 72,298 participants and investigate genotypes for 7,079,946 SNPs. Sex, age, and BMI were set as covariates for GWAS, and significant SNPs were identified in the discovery and replication stages using logistic regression. RESULTS: GWAS of the entire cohort revealed a total of five significant SNPs: rs117026536 (LPL), rs651821 (APOA5), rs9804646 (APOA5), rs9926440 (CETP), and rs429358 (APOE). GWAS of the male subjects revealed a total of four significant SNPs. While rs9804646 (APOA5) and rs429358 (APOE) were significant for all the subjects, rs662799 (APOA5) and rs56156922 (CETP) were significant only for the male subjects. GWAS of the female subjects revealed two significant SNPs, rs651821 (APOA5) and rs9804646 (APOA5), both of which were significant in all the subjects. CONCLUSION: This is the first study to identify sex-related differences in genetic polymorphisms in Korean populations with dyslipidemia. Further studies considering environmental variables will be needed to elucidate these sex-related genetic differences in dyslipidemia. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12944-022-01736-5.
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spelling pubmed-96858542022-11-25 Sex-related differences in single nucleotide polymorphisms associated with dyslipidemia in a Korean population Lee, Gyeonghee Jeon, Hye Kyung Yoo, Hae Young Lipids Health Dis Research BACKGROUND: The prevalence of dyslipidemia has increased steadily in Korea, and the incidence of dyslipidemia differs by sex. In this study, we identified single nucleotide polymorphisms (SNPs) related to dyslipidemia in Korean cohorts through genome-wide association study (GWAS) analysis. METHODS: Genotyping was conducted to determine the genotypes of 72,298 participants and investigate genotypes for 7,079,946 SNPs. Sex, age, and BMI were set as covariates for GWAS, and significant SNPs were identified in the discovery and replication stages using logistic regression. RESULTS: GWAS of the entire cohort revealed a total of five significant SNPs: rs117026536 (LPL), rs651821 (APOA5), rs9804646 (APOA5), rs9926440 (CETP), and rs429358 (APOE). GWAS of the male subjects revealed a total of four significant SNPs. While rs9804646 (APOA5) and rs429358 (APOE) were significant for all the subjects, rs662799 (APOA5) and rs56156922 (CETP) were significant only for the male subjects. GWAS of the female subjects revealed two significant SNPs, rs651821 (APOA5) and rs9804646 (APOA5), both of which were significant in all the subjects. CONCLUSION: This is the first study to identify sex-related differences in genetic polymorphisms in Korean populations with dyslipidemia. Further studies considering environmental variables will be needed to elucidate these sex-related genetic differences in dyslipidemia. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12944-022-01736-5. BioMed Central 2022-11-23 /pmc/articles/PMC9685854/ /pubmed/36419087 http://dx.doi.org/10.1186/s12944-022-01736-5 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Lee, Gyeonghee
Jeon, Hye Kyung
Yoo, Hae Young
Sex-related differences in single nucleotide polymorphisms associated with dyslipidemia in a Korean population
title Sex-related differences in single nucleotide polymorphisms associated with dyslipidemia in a Korean population
title_full Sex-related differences in single nucleotide polymorphisms associated with dyslipidemia in a Korean population
title_fullStr Sex-related differences in single nucleotide polymorphisms associated with dyslipidemia in a Korean population
title_full_unstemmed Sex-related differences in single nucleotide polymorphisms associated with dyslipidemia in a Korean population
title_short Sex-related differences in single nucleotide polymorphisms associated with dyslipidemia in a Korean population
title_sort sex-related differences in single nucleotide polymorphisms associated with dyslipidemia in a korean population
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9685854/
https://www.ncbi.nlm.nih.gov/pubmed/36419087
http://dx.doi.org/10.1186/s12944-022-01736-5
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