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Machine Learning in the Classification of Pediatric Posterior Fossa Tumors: A Systematic Review

SIMPLE SUMMARY: Diagnosis of posterior fossa tumors is challenging yet proper classification is imperative given that treatment decisions diverge based on tumor type. The aim of this systematic review is to summarize the current state of machine learning methods developed as diagnostic tools for the...

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Autores principales: Yearley, Alexander G., Blitz, Sarah E., Patel, Ruchit V., Chan, Alvin, Baird, Lissa C., Friedman, Gregory K., Arnaout, Omar, Smith, Timothy R., Bernstock, Joshua D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9688156/
https://www.ncbi.nlm.nih.gov/pubmed/36428701
http://dx.doi.org/10.3390/cancers14225608
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author Yearley, Alexander G.
Blitz, Sarah E.
Patel, Ruchit V.
Chan, Alvin
Baird, Lissa C.
Friedman, Gregory K.
Arnaout, Omar
Smith, Timothy R.
Bernstock, Joshua D.
author_facet Yearley, Alexander G.
Blitz, Sarah E.
Patel, Ruchit V.
Chan, Alvin
Baird, Lissa C.
Friedman, Gregory K.
Arnaout, Omar
Smith, Timothy R.
Bernstock, Joshua D.
author_sort Yearley, Alexander G.
collection PubMed
description SIMPLE SUMMARY: Diagnosis of posterior fossa tumors is challenging yet proper classification is imperative given that treatment decisions diverge based on tumor type. The aim of this systematic review is to summarize the current state of machine learning methods developed as diagnostic tools for these pediatric brain tumors. We found that, while individual algorithms were quite efficacious, the field is limited by its heterogeneity in methods, outcome reporting, and study populations. We identify common limitations in the study and development of these algorithms and make recommendations as to how they can be overcome. If incorporated into algorithm design, the practical guidelines outlined in this review could help to bridge the gap between theoretical algorithm diagnostic testing and practical clinical application for a wide variety of pathologies. ABSTRACT: Background: Posterior fossa tumors (PFTs) are a morbid group of central nervous system tumors that most often present in childhood. While early diagnosis is critical to drive appropriate treatment, definitive diagnosis is currently only achievable through invasive tissue collection and histopathological analyses. Machine learning has been investigated as an alternative means of diagnosis. In this systematic review and meta-analysis, we evaluated the primary literature to identify all machine learning algorithms developed to classify and diagnose pediatric PFTs using imaging or molecular data. Methods: Of the 433 primary papers identified in PubMed, EMBASE, and Web of Science, 25 ultimately met the inclusion criteria. The included papers were extracted for algorithm architecture, study parameters, performance, strengths, and limitations. Results: The algorithms exhibited variable performance based on sample size, classifier(s) used, and individual tumor types being investigated. Ependymoma, medulloblastoma, and pilocytic astrocytoma were the most studied tumors with algorithm accuracies ranging from 37.5% to 94.5%. A minority of studies compared the developed algorithm to a trained neuroradiologist, with three imaging-based algorithms yielding superior performance. Common algorithm and study limitations included small sample sizes, uneven representation of individual tumor types, inconsistent performance reporting, and a lack of application in the clinical environment. Conclusions: Artificial intelligence has the potential to improve the speed and accuracy of diagnosis in this field if the right algorithm is applied to the right scenario. Work is needed to standardize outcome reporting and facilitate additional trials to allow for clinical uptake.
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spelling pubmed-96881562022-11-25 Machine Learning in the Classification of Pediatric Posterior Fossa Tumors: A Systematic Review Yearley, Alexander G. Blitz, Sarah E. Patel, Ruchit V. Chan, Alvin Baird, Lissa C. Friedman, Gregory K. Arnaout, Omar Smith, Timothy R. Bernstock, Joshua D. Cancers (Basel) Review SIMPLE SUMMARY: Diagnosis of posterior fossa tumors is challenging yet proper classification is imperative given that treatment decisions diverge based on tumor type. The aim of this systematic review is to summarize the current state of machine learning methods developed as diagnostic tools for these pediatric brain tumors. We found that, while individual algorithms were quite efficacious, the field is limited by its heterogeneity in methods, outcome reporting, and study populations. We identify common limitations in the study and development of these algorithms and make recommendations as to how they can be overcome. If incorporated into algorithm design, the practical guidelines outlined in this review could help to bridge the gap between theoretical algorithm diagnostic testing and practical clinical application for a wide variety of pathologies. ABSTRACT: Background: Posterior fossa tumors (PFTs) are a morbid group of central nervous system tumors that most often present in childhood. While early diagnosis is critical to drive appropriate treatment, definitive diagnosis is currently only achievable through invasive tissue collection and histopathological analyses. Machine learning has been investigated as an alternative means of diagnosis. In this systematic review and meta-analysis, we evaluated the primary literature to identify all machine learning algorithms developed to classify and diagnose pediatric PFTs using imaging or molecular data. Methods: Of the 433 primary papers identified in PubMed, EMBASE, and Web of Science, 25 ultimately met the inclusion criteria. The included papers were extracted for algorithm architecture, study parameters, performance, strengths, and limitations. Results: The algorithms exhibited variable performance based on sample size, classifier(s) used, and individual tumor types being investigated. Ependymoma, medulloblastoma, and pilocytic astrocytoma were the most studied tumors with algorithm accuracies ranging from 37.5% to 94.5%. A minority of studies compared the developed algorithm to a trained neuroradiologist, with three imaging-based algorithms yielding superior performance. Common algorithm and study limitations included small sample sizes, uneven representation of individual tumor types, inconsistent performance reporting, and a lack of application in the clinical environment. Conclusions: Artificial intelligence has the potential to improve the speed and accuracy of diagnosis in this field if the right algorithm is applied to the right scenario. Work is needed to standardize outcome reporting and facilitate additional trials to allow for clinical uptake. MDPI 2022-11-15 /pmc/articles/PMC9688156/ /pubmed/36428701 http://dx.doi.org/10.3390/cancers14225608 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Yearley, Alexander G.
Blitz, Sarah E.
Patel, Ruchit V.
Chan, Alvin
Baird, Lissa C.
Friedman, Gregory K.
Arnaout, Omar
Smith, Timothy R.
Bernstock, Joshua D.
Machine Learning in the Classification of Pediatric Posterior Fossa Tumors: A Systematic Review
title Machine Learning in the Classification of Pediatric Posterior Fossa Tumors: A Systematic Review
title_full Machine Learning in the Classification of Pediatric Posterior Fossa Tumors: A Systematic Review
title_fullStr Machine Learning in the Classification of Pediatric Posterior Fossa Tumors: A Systematic Review
title_full_unstemmed Machine Learning in the Classification of Pediatric Posterior Fossa Tumors: A Systematic Review
title_short Machine Learning in the Classification of Pediatric Posterior Fossa Tumors: A Systematic Review
title_sort machine learning in the classification of pediatric posterior fossa tumors: a systematic review
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9688156/
https://www.ncbi.nlm.nih.gov/pubmed/36428701
http://dx.doi.org/10.3390/cancers14225608
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