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CRISPR-Cas-Integrated LAMP
Pathogen-specific point-of-care (PoC) diagnostic tests have become an important need in the fight against infectious diseases and epidemics in recent years. PoC diagnostic tests are designed with the following parameters in mind: rapidity, accuracy, sensitivity, specificity, and ease of use. Molecul...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9688180/ https://www.ncbi.nlm.nih.gov/pubmed/36421156 http://dx.doi.org/10.3390/bios12111035 |
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author | Atçeken, Nazente Yigci, Defne Ozdalgic, Berin Tasoglu, Savas |
author_facet | Atçeken, Nazente Yigci, Defne Ozdalgic, Berin Tasoglu, Savas |
author_sort | Atçeken, Nazente |
collection | PubMed |
description | Pathogen-specific point-of-care (PoC) diagnostic tests have become an important need in the fight against infectious diseases and epidemics in recent years. PoC diagnostic tests are designed with the following parameters in mind: rapidity, accuracy, sensitivity, specificity, and ease of use. Molecular techniques are the gold standard for pathogen detection due to their accuracy and specificity. There are various limitations in adapting molecular diagnostic methods to PoC diagnostic tests. Efforts to overcome limitations are focused on the development of integrated molecular diagnostics by utilizing the latest technologies available to create the most successful PoC diagnostic platforms. With this point of view, a new generation technology was developed by combining loop-mediated isothermal amplification (LAMP) technology with clustered regularly interspaced short palindromic repeat (CRISPR)-associated (CRISPR-Cas) technology. This integrated approach benefits from the properties of LAMP technology, namely its high efficiency, short turnaround time, and the lack of need for a complex device. It also makes use of the programmable function of CRISPR-Cas technology and the collateral cleavage activity of certain Cas proteins that allow for convenient reporter detection. Thus, this combined technology enables the development of PoC diagnostic tests with high sensitivity, specificity, and ease of use without the need for complicated devices. In this review, we discuss the advantages and limitations of the CRISPR/Cas combined LAMP technology. We review current limitations to convert CRISPR combined LAMP into pathogen-specific PoC platforms. Furthermore, we point out the need to design more useful PoC platforms using microfabrication technologies by developing strategies that overcome the limitations of this new technology, reduce its complexity, and reduce the risk of contamination. |
format | Online Article Text |
id | pubmed-9688180 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-96881802022-11-25 CRISPR-Cas-Integrated LAMP Atçeken, Nazente Yigci, Defne Ozdalgic, Berin Tasoglu, Savas Biosensors (Basel) Review Pathogen-specific point-of-care (PoC) diagnostic tests have become an important need in the fight against infectious diseases and epidemics in recent years. PoC diagnostic tests are designed with the following parameters in mind: rapidity, accuracy, sensitivity, specificity, and ease of use. Molecular techniques are the gold standard for pathogen detection due to their accuracy and specificity. There are various limitations in adapting molecular diagnostic methods to PoC diagnostic tests. Efforts to overcome limitations are focused on the development of integrated molecular diagnostics by utilizing the latest technologies available to create the most successful PoC diagnostic platforms. With this point of view, a new generation technology was developed by combining loop-mediated isothermal amplification (LAMP) technology with clustered regularly interspaced short palindromic repeat (CRISPR)-associated (CRISPR-Cas) technology. This integrated approach benefits from the properties of LAMP technology, namely its high efficiency, short turnaround time, and the lack of need for a complex device. It also makes use of the programmable function of CRISPR-Cas technology and the collateral cleavage activity of certain Cas proteins that allow for convenient reporter detection. Thus, this combined technology enables the development of PoC diagnostic tests with high sensitivity, specificity, and ease of use without the need for complicated devices. In this review, we discuss the advantages and limitations of the CRISPR/Cas combined LAMP technology. We review current limitations to convert CRISPR combined LAMP into pathogen-specific PoC platforms. Furthermore, we point out the need to design more useful PoC platforms using microfabrication technologies by developing strategies that overcome the limitations of this new technology, reduce its complexity, and reduce the risk of contamination. MDPI 2022-11-17 /pmc/articles/PMC9688180/ /pubmed/36421156 http://dx.doi.org/10.3390/bios12111035 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Review Atçeken, Nazente Yigci, Defne Ozdalgic, Berin Tasoglu, Savas CRISPR-Cas-Integrated LAMP |
title | CRISPR-Cas-Integrated LAMP |
title_full | CRISPR-Cas-Integrated LAMP |
title_fullStr | CRISPR-Cas-Integrated LAMP |
title_full_unstemmed | CRISPR-Cas-Integrated LAMP |
title_short | CRISPR-Cas-Integrated LAMP |
title_sort | crispr-cas-integrated lamp |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9688180/ https://www.ncbi.nlm.nih.gov/pubmed/36421156 http://dx.doi.org/10.3390/bios12111035 |
work_keys_str_mv | AT atcekennazente crisprcasintegratedlamp AT yigcidefne crisprcasintegratedlamp AT ozdalgicberin crisprcasintegratedlamp AT tasoglusavas crisprcasintegratedlamp |