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The Use of Biological Sensors and Instrumental Analysis to Discriminate COVID-19 Odor Signatures

The spread of SARS-CoV-2, which causes the disease COVID-19, is difficult to control as some positive individuals, capable of transmitting the disease, can be asymptomatic. Thus, it remains critical to generate noninvasive, inexpensive COVID-19 screening systems. Two such methods include detection c...

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Autores principales: Gokool, Vidia A., Crespo-Cajigas, Janet, Mallikarjun, Amritha, Collins, Amanda, Kane, Sarah A., Plymouth, Victoria, Nguyen, Elizabeth, Abella, Benjamin S., Holness, Howard K., Furton, Kenneth G., Johnson, Alan T. Charlie, Otto, Cynthia M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9688190/
https://www.ncbi.nlm.nih.gov/pubmed/36421122
http://dx.doi.org/10.3390/bios12111003
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author Gokool, Vidia A.
Crespo-Cajigas, Janet
Mallikarjun, Amritha
Collins, Amanda
Kane, Sarah A.
Plymouth, Victoria
Nguyen, Elizabeth
Abella, Benjamin S.
Holness, Howard K.
Furton, Kenneth G.
Johnson, Alan T. Charlie
Otto, Cynthia M.
author_facet Gokool, Vidia A.
Crespo-Cajigas, Janet
Mallikarjun, Amritha
Collins, Amanda
Kane, Sarah A.
Plymouth, Victoria
Nguyen, Elizabeth
Abella, Benjamin S.
Holness, Howard K.
Furton, Kenneth G.
Johnson, Alan T. Charlie
Otto, Cynthia M.
author_sort Gokool, Vidia A.
collection PubMed
description The spread of SARS-CoV-2, which causes the disease COVID-19, is difficult to control as some positive individuals, capable of transmitting the disease, can be asymptomatic. Thus, it remains critical to generate noninvasive, inexpensive COVID-19 screening systems. Two such methods include detection canines and analytical instrumentation, both of which detect volatile organic compounds associated with SARS-CoV-2. In this study, the performance of trained detection dogs is compared to a noninvasive headspace-solid phase microextraction-gas chromatography-mass spectrometry (HS-SPME-GC-MS) approach to identifying COVID-19 positive individuals. Five dogs were trained to detect the odor signature associated with COVID-19. They varied in performance, with the two highest-performing dogs averaging 88% sensitivity and 95% specificity over five double-blind tests. The three lowest-performing dogs averaged 46% sensitivity and 87% specificity. The optimized linear discriminant analysis (LDA) model, developed using HS-SPME-GC-MS, displayed a 100% true positive rate and a 100% true negative rate using leave-one-out cross-validation. However, the non-optimized LDA model displayed difficulty in categorizing animal hair-contaminated samples, while animal hair did not impact the dogs’ performance. In conclusion, the HS-SPME-GC-MS approach for noninvasive COVID-19 detection more accurately discriminated between COVID-19 positive and COVID-19 negative samples; however, dogs performed better than the computational model when non-ideal samples were presented.
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spelling pubmed-96881902022-11-25 The Use of Biological Sensors and Instrumental Analysis to Discriminate COVID-19 Odor Signatures Gokool, Vidia A. Crespo-Cajigas, Janet Mallikarjun, Amritha Collins, Amanda Kane, Sarah A. Plymouth, Victoria Nguyen, Elizabeth Abella, Benjamin S. Holness, Howard K. Furton, Kenneth G. Johnson, Alan T. Charlie Otto, Cynthia M. Biosensors (Basel) Article The spread of SARS-CoV-2, which causes the disease COVID-19, is difficult to control as some positive individuals, capable of transmitting the disease, can be asymptomatic. Thus, it remains critical to generate noninvasive, inexpensive COVID-19 screening systems. Two such methods include detection canines and analytical instrumentation, both of which detect volatile organic compounds associated with SARS-CoV-2. In this study, the performance of trained detection dogs is compared to a noninvasive headspace-solid phase microextraction-gas chromatography-mass spectrometry (HS-SPME-GC-MS) approach to identifying COVID-19 positive individuals. Five dogs were trained to detect the odor signature associated with COVID-19. They varied in performance, with the two highest-performing dogs averaging 88% sensitivity and 95% specificity over five double-blind tests. The three lowest-performing dogs averaged 46% sensitivity and 87% specificity. The optimized linear discriminant analysis (LDA) model, developed using HS-SPME-GC-MS, displayed a 100% true positive rate and a 100% true negative rate using leave-one-out cross-validation. However, the non-optimized LDA model displayed difficulty in categorizing animal hair-contaminated samples, while animal hair did not impact the dogs’ performance. In conclusion, the HS-SPME-GC-MS approach for noninvasive COVID-19 detection more accurately discriminated between COVID-19 positive and COVID-19 negative samples; however, dogs performed better than the computational model when non-ideal samples were presented. MDPI 2022-11-11 /pmc/articles/PMC9688190/ /pubmed/36421122 http://dx.doi.org/10.3390/bios12111003 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Gokool, Vidia A.
Crespo-Cajigas, Janet
Mallikarjun, Amritha
Collins, Amanda
Kane, Sarah A.
Plymouth, Victoria
Nguyen, Elizabeth
Abella, Benjamin S.
Holness, Howard K.
Furton, Kenneth G.
Johnson, Alan T. Charlie
Otto, Cynthia M.
The Use of Biological Sensors and Instrumental Analysis to Discriminate COVID-19 Odor Signatures
title The Use of Biological Sensors and Instrumental Analysis to Discriminate COVID-19 Odor Signatures
title_full The Use of Biological Sensors and Instrumental Analysis to Discriminate COVID-19 Odor Signatures
title_fullStr The Use of Biological Sensors and Instrumental Analysis to Discriminate COVID-19 Odor Signatures
title_full_unstemmed The Use of Biological Sensors and Instrumental Analysis to Discriminate COVID-19 Odor Signatures
title_short The Use of Biological Sensors and Instrumental Analysis to Discriminate COVID-19 Odor Signatures
title_sort use of biological sensors and instrumental analysis to discriminate covid-19 odor signatures
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9688190/
https://www.ncbi.nlm.nih.gov/pubmed/36421122
http://dx.doi.org/10.3390/bios12111003
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