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The Use of Biological Sensors and Instrumental Analysis to Discriminate COVID-19 Odor Signatures
The spread of SARS-CoV-2, which causes the disease COVID-19, is difficult to control as some positive individuals, capable of transmitting the disease, can be asymptomatic. Thus, it remains critical to generate noninvasive, inexpensive COVID-19 screening systems. Two such methods include detection c...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9688190/ https://www.ncbi.nlm.nih.gov/pubmed/36421122 http://dx.doi.org/10.3390/bios12111003 |
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author | Gokool, Vidia A. Crespo-Cajigas, Janet Mallikarjun, Amritha Collins, Amanda Kane, Sarah A. Plymouth, Victoria Nguyen, Elizabeth Abella, Benjamin S. Holness, Howard K. Furton, Kenneth G. Johnson, Alan T. Charlie Otto, Cynthia M. |
author_facet | Gokool, Vidia A. Crespo-Cajigas, Janet Mallikarjun, Amritha Collins, Amanda Kane, Sarah A. Plymouth, Victoria Nguyen, Elizabeth Abella, Benjamin S. Holness, Howard K. Furton, Kenneth G. Johnson, Alan T. Charlie Otto, Cynthia M. |
author_sort | Gokool, Vidia A. |
collection | PubMed |
description | The spread of SARS-CoV-2, which causes the disease COVID-19, is difficult to control as some positive individuals, capable of transmitting the disease, can be asymptomatic. Thus, it remains critical to generate noninvasive, inexpensive COVID-19 screening systems. Two such methods include detection canines and analytical instrumentation, both of which detect volatile organic compounds associated with SARS-CoV-2. In this study, the performance of trained detection dogs is compared to a noninvasive headspace-solid phase microextraction-gas chromatography-mass spectrometry (HS-SPME-GC-MS) approach to identifying COVID-19 positive individuals. Five dogs were trained to detect the odor signature associated with COVID-19. They varied in performance, with the two highest-performing dogs averaging 88% sensitivity and 95% specificity over five double-blind tests. The three lowest-performing dogs averaged 46% sensitivity and 87% specificity. The optimized linear discriminant analysis (LDA) model, developed using HS-SPME-GC-MS, displayed a 100% true positive rate and a 100% true negative rate using leave-one-out cross-validation. However, the non-optimized LDA model displayed difficulty in categorizing animal hair-contaminated samples, while animal hair did not impact the dogs’ performance. In conclusion, the HS-SPME-GC-MS approach for noninvasive COVID-19 detection more accurately discriminated between COVID-19 positive and COVID-19 negative samples; however, dogs performed better than the computational model when non-ideal samples were presented. |
format | Online Article Text |
id | pubmed-9688190 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-96881902022-11-25 The Use of Biological Sensors and Instrumental Analysis to Discriminate COVID-19 Odor Signatures Gokool, Vidia A. Crespo-Cajigas, Janet Mallikarjun, Amritha Collins, Amanda Kane, Sarah A. Plymouth, Victoria Nguyen, Elizabeth Abella, Benjamin S. Holness, Howard K. Furton, Kenneth G. Johnson, Alan T. Charlie Otto, Cynthia M. Biosensors (Basel) Article The spread of SARS-CoV-2, which causes the disease COVID-19, is difficult to control as some positive individuals, capable of transmitting the disease, can be asymptomatic. Thus, it remains critical to generate noninvasive, inexpensive COVID-19 screening systems. Two such methods include detection canines and analytical instrumentation, both of which detect volatile organic compounds associated with SARS-CoV-2. In this study, the performance of trained detection dogs is compared to a noninvasive headspace-solid phase microextraction-gas chromatography-mass spectrometry (HS-SPME-GC-MS) approach to identifying COVID-19 positive individuals. Five dogs were trained to detect the odor signature associated with COVID-19. They varied in performance, with the two highest-performing dogs averaging 88% sensitivity and 95% specificity over five double-blind tests. The three lowest-performing dogs averaged 46% sensitivity and 87% specificity. The optimized linear discriminant analysis (LDA) model, developed using HS-SPME-GC-MS, displayed a 100% true positive rate and a 100% true negative rate using leave-one-out cross-validation. However, the non-optimized LDA model displayed difficulty in categorizing animal hair-contaminated samples, while animal hair did not impact the dogs’ performance. In conclusion, the HS-SPME-GC-MS approach for noninvasive COVID-19 detection more accurately discriminated between COVID-19 positive and COVID-19 negative samples; however, dogs performed better than the computational model when non-ideal samples were presented. MDPI 2022-11-11 /pmc/articles/PMC9688190/ /pubmed/36421122 http://dx.doi.org/10.3390/bios12111003 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Gokool, Vidia A. Crespo-Cajigas, Janet Mallikarjun, Amritha Collins, Amanda Kane, Sarah A. Plymouth, Victoria Nguyen, Elizabeth Abella, Benjamin S. Holness, Howard K. Furton, Kenneth G. Johnson, Alan T. Charlie Otto, Cynthia M. The Use of Biological Sensors and Instrumental Analysis to Discriminate COVID-19 Odor Signatures |
title | The Use of Biological Sensors and Instrumental Analysis to Discriminate COVID-19 Odor Signatures |
title_full | The Use of Biological Sensors and Instrumental Analysis to Discriminate COVID-19 Odor Signatures |
title_fullStr | The Use of Biological Sensors and Instrumental Analysis to Discriminate COVID-19 Odor Signatures |
title_full_unstemmed | The Use of Biological Sensors and Instrumental Analysis to Discriminate COVID-19 Odor Signatures |
title_short | The Use of Biological Sensors and Instrumental Analysis to Discriminate COVID-19 Odor Signatures |
title_sort | use of biological sensors and instrumental analysis to discriminate covid-19 odor signatures |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9688190/ https://www.ncbi.nlm.nih.gov/pubmed/36421122 http://dx.doi.org/10.3390/bios12111003 |
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