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Immune Pathway and Gene Database (IMPAGT) Revealed the Immune Dysregulation Dynamics and Overactivation of the PI3K/Akt Pathway in Tumor Buddings of Cervical Cancer

Tumor budding (TB) is a small cluster of malignant cells at the invasive front of a tumor. Despite being an adverse prognosis marker, little research has been conducted on the tumor immune microenvironment of tumor buddings, especially in cervical cancer. Therefore, RNA sequencing was performed usin...

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Autores principales: Choi, Yeseul, Park, Nora Jee-Young, Le, Tan Minh, Lee, Eunmi, Lee, Donghyeon, Nguyen, Hong Duc Thi, Cho, Junghwan, Park, Ji-Young, Han, Hyung Soo, Chong, Gun Oh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9688570/
https://www.ncbi.nlm.nih.gov/pubmed/36354662
http://dx.doi.org/10.3390/cimb44110350
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author Choi, Yeseul
Park, Nora Jee-Young
Le, Tan Minh
Lee, Eunmi
Lee, Donghyeon
Nguyen, Hong Duc Thi
Cho, Junghwan
Park, Ji-Young
Han, Hyung Soo
Chong, Gun Oh
author_facet Choi, Yeseul
Park, Nora Jee-Young
Le, Tan Minh
Lee, Eunmi
Lee, Donghyeon
Nguyen, Hong Duc Thi
Cho, Junghwan
Park, Ji-Young
Han, Hyung Soo
Chong, Gun Oh
author_sort Choi, Yeseul
collection PubMed
description Tumor budding (TB) is a small cluster of malignant cells at the invasive front of a tumor. Despite being an adverse prognosis marker, little research has been conducted on the tumor immune microenvironment of tumor buddings, especially in cervical cancer. Therefore, RNA sequencing was performed using 21 formalin-fixed, paraffin-embedded slides of cervical tissues, and differentially expressed genes (DEGs) were analyzed. Immune Pathway and Gene Database (IMPAGT) was generated for immune profiling. “Pathway in Cancer” was identified as the most enriched pathway for both up- and downregulated DEGs. Kyoto Encyclopedia of Genes and Genomes Mapper and Gene Ontology further revealed the activation of the PI3K/Akt signaling pathway. An IMPAGT analysis revealed immune dysregulation even at the tumor budding stage, especially in the PI3K/Akt/mTOR axis, with a high efficiency and integrity. These findings emphasized the clinical significance of tumor buddings and the necessity of blocking the overactivation of the PI3K/Akt/mTOR pathway to improve targeted therapy in cervical cancer.
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spelling pubmed-96885702022-11-25 Immune Pathway and Gene Database (IMPAGT) Revealed the Immune Dysregulation Dynamics and Overactivation of the PI3K/Akt Pathway in Tumor Buddings of Cervical Cancer Choi, Yeseul Park, Nora Jee-Young Le, Tan Minh Lee, Eunmi Lee, Donghyeon Nguyen, Hong Duc Thi Cho, Junghwan Park, Ji-Young Han, Hyung Soo Chong, Gun Oh Curr Issues Mol Biol Article Tumor budding (TB) is a small cluster of malignant cells at the invasive front of a tumor. Despite being an adverse prognosis marker, little research has been conducted on the tumor immune microenvironment of tumor buddings, especially in cervical cancer. Therefore, RNA sequencing was performed using 21 formalin-fixed, paraffin-embedded slides of cervical tissues, and differentially expressed genes (DEGs) were analyzed. Immune Pathway and Gene Database (IMPAGT) was generated for immune profiling. “Pathway in Cancer” was identified as the most enriched pathway for both up- and downregulated DEGs. Kyoto Encyclopedia of Genes and Genomes Mapper and Gene Ontology further revealed the activation of the PI3K/Akt signaling pathway. An IMPAGT analysis revealed immune dysregulation even at the tumor budding stage, especially in the PI3K/Akt/mTOR axis, with a high efficiency and integrity. These findings emphasized the clinical significance of tumor buddings and the necessity of blocking the overactivation of the PI3K/Akt/mTOR pathway to improve targeted therapy in cervical cancer. MDPI 2022-10-23 /pmc/articles/PMC9688570/ /pubmed/36354662 http://dx.doi.org/10.3390/cimb44110350 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Choi, Yeseul
Park, Nora Jee-Young
Le, Tan Minh
Lee, Eunmi
Lee, Donghyeon
Nguyen, Hong Duc Thi
Cho, Junghwan
Park, Ji-Young
Han, Hyung Soo
Chong, Gun Oh
Immune Pathway and Gene Database (IMPAGT) Revealed the Immune Dysregulation Dynamics and Overactivation of the PI3K/Akt Pathway in Tumor Buddings of Cervical Cancer
title Immune Pathway and Gene Database (IMPAGT) Revealed the Immune Dysregulation Dynamics and Overactivation of the PI3K/Akt Pathway in Tumor Buddings of Cervical Cancer
title_full Immune Pathway and Gene Database (IMPAGT) Revealed the Immune Dysregulation Dynamics and Overactivation of the PI3K/Akt Pathway in Tumor Buddings of Cervical Cancer
title_fullStr Immune Pathway and Gene Database (IMPAGT) Revealed the Immune Dysregulation Dynamics and Overactivation of the PI3K/Akt Pathway in Tumor Buddings of Cervical Cancer
title_full_unstemmed Immune Pathway and Gene Database (IMPAGT) Revealed the Immune Dysregulation Dynamics and Overactivation of the PI3K/Akt Pathway in Tumor Buddings of Cervical Cancer
title_short Immune Pathway and Gene Database (IMPAGT) Revealed the Immune Dysregulation Dynamics and Overactivation of the PI3K/Akt Pathway in Tumor Buddings of Cervical Cancer
title_sort immune pathway and gene database (impagt) revealed the immune dysregulation dynamics and overactivation of the pi3k/akt pathway in tumor buddings of cervical cancer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9688570/
https://www.ncbi.nlm.nih.gov/pubmed/36354662
http://dx.doi.org/10.3390/cimb44110350
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