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EVAE-Net: An Ensemble Variational Autoencoder Deep Learning Network for COVID-19 Classification Based on Chest X-ray Images

The COVID-19 pandemic has had a significant impact on many lives and the economies of many countries since late December 2019. Early detection with high accuracy is essential to help break the chain of transmission. Several radiological methodologies, such as CT scan and chest X-ray, have been emplo...

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Autores principales: Addo, Daniel, Zhou, Shijie, Jackson, Jehoiada Kofi, Nneji, Grace Ugochi, Monday, Happy Nkanta, Sarpong, Kwabena, Patamia, Rutherford Agbeshi, Ekong, Favour, Owusu-Agyei, Christyn Akosua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9689048/
https://www.ncbi.nlm.nih.gov/pubmed/36359413
http://dx.doi.org/10.3390/diagnostics12112569
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author Addo, Daniel
Zhou, Shijie
Jackson, Jehoiada Kofi
Nneji, Grace Ugochi
Monday, Happy Nkanta
Sarpong, Kwabena
Patamia, Rutherford Agbeshi
Ekong, Favour
Owusu-Agyei, Christyn Akosua
author_facet Addo, Daniel
Zhou, Shijie
Jackson, Jehoiada Kofi
Nneji, Grace Ugochi
Monday, Happy Nkanta
Sarpong, Kwabena
Patamia, Rutherford Agbeshi
Ekong, Favour
Owusu-Agyei, Christyn Akosua
author_sort Addo, Daniel
collection PubMed
description The COVID-19 pandemic has had a significant impact on many lives and the economies of many countries since late December 2019. Early detection with high accuracy is essential to help break the chain of transmission. Several radiological methodologies, such as CT scan and chest X-ray, have been employed in diagnosing and monitoring COVID-19 disease. Still, these methodologies are time-consuming and require trial and error. Machine learning techniques are currently being applied by several studies to deal with COVID-19. This study exploits the latent embeddings of variational autoencoders combined with ensemble techniques to propose three effective EVAE-Net models to detect COVID-19 disease. Two encoders are trained on chest X-ray images to generate two feature maps. The feature maps are concatenated and passed to either a combined or individual reparameterization phase to generate latent embeddings by sampling from a distribution. The latent embeddings are concatenated and passed to a classification head for classification. The COVID-19 Radiography Dataset from Kaggle is the source of chest X-ray images. The performances of the three models are evaluated. The proposed model shows satisfactory performance, with the best model achieving [Formula: see text] and [Formula: see text] accuracy on four classes and three classes, respectively.
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spelling pubmed-96890482022-11-25 EVAE-Net: An Ensemble Variational Autoencoder Deep Learning Network for COVID-19 Classification Based on Chest X-ray Images Addo, Daniel Zhou, Shijie Jackson, Jehoiada Kofi Nneji, Grace Ugochi Monday, Happy Nkanta Sarpong, Kwabena Patamia, Rutherford Agbeshi Ekong, Favour Owusu-Agyei, Christyn Akosua Diagnostics (Basel) Article The COVID-19 pandemic has had a significant impact on many lives and the economies of many countries since late December 2019. Early detection with high accuracy is essential to help break the chain of transmission. Several radiological methodologies, such as CT scan and chest X-ray, have been employed in diagnosing and monitoring COVID-19 disease. Still, these methodologies are time-consuming and require trial and error. Machine learning techniques are currently being applied by several studies to deal with COVID-19. This study exploits the latent embeddings of variational autoencoders combined with ensemble techniques to propose three effective EVAE-Net models to detect COVID-19 disease. Two encoders are trained on chest X-ray images to generate two feature maps. The feature maps are concatenated and passed to either a combined or individual reparameterization phase to generate latent embeddings by sampling from a distribution. The latent embeddings are concatenated and passed to a classification head for classification. The COVID-19 Radiography Dataset from Kaggle is the source of chest X-ray images. The performances of the three models are evaluated. The proposed model shows satisfactory performance, with the best model achieving [Formula: see text] and [Formula: see text] accuracy on four classes and three classes, respectively. MDPI 2022-10-22 /pmc/articles/PMC9689048/ /pubmed/36359413 http://dx.doi.org/10.3390/diagnostics12112569 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Addo, Daniel
Zhou, Shijie
Jackson, Jehoiada Kofi
Nneji, Grace Ugochi
Monday, Happy Nkanta
Sarpong, Kwabena
Patamia, Rutherford Agbeshi
Ekong, Favour
Owusu-Agyei, Christyn Akosua
EVAE-Net: An Ensemble Variational Autoencoder Deep Learning Network for COVID-19 Classification Based on Chest X-ray Images
title EVAE-Net: An Ensemble Variational Autoencoder Deep Learning Network for COVID-19 Classification Based on Chest X-ray Images
title_full EVAE-Net: An Ensemble Variational Autoencoder Deep Learning Network for COVID-19 Classification Based on Chest X-ray Images
title_fullStr EVAE-Net: An Ensemble Variational Autoencoder Deep Learning Network for COVID-19 Classification Based on Chest X-ray Images
title_full_unstemmed EVAE-Net: An Ensemble Variational Autoencoder Deep Learning Network for COVID-19 Classification Based on Chest X-ray Images
title_short EVAE-Net: An Ensemble Variational Autoencoder Deep Learning Network for COVID-19 Classification Based on Chest X-ray Images
title_sort evae-net: an ensemble variational autoencoder deep learning network for covid-19 classification based on chest x-ray images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9689048/
https://www.ncbi.nlm.nih.gov/pubmed/36359413
http://dx.doi.org/10.3390/diagnostics12112569
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