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EVAE-Net: An Ensemble Variational Autoencoder Deep Learning Network for COVID-19 Classification Based on Chest X-ray Images
The COVID-19 pandemic has had a significant impact on many lives and the economies of many countries since late December 2019. Early detection with high accuracy is essential to help break the chain of transmission. Several radiological methodologies, such as CT scan and chest X-ray, have been emplo...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9689048/ https://www.ncbi.nlm.nih.gov/pubmed/36359413 http://dx.doi.org/10.3390/diagnostics12112569 |
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author | Addo, Daniel Zhou, Shijie Jackson, Jehoiada Kofi Nneji, Grace Ugochi Monday, Happy Nkanta Sarpong, Kwabena Patamia, Rutherford Agbeshi Ekong, Favour Owusu-Agyei, Christyn Akosua |
author_facet | Addo, Daniel Zhou, Shijie Jackson, Jehoiada Kofi Nneji, Grace Ugochi Monday, Happy Nkanta Sarpong, Kwabena Patamia, Rutherford Agbeshi Ekong, Favour Owusu-Agyei, Christyn Akosua |
author_sort | Addo, Daniel |
collection | PubMed |
description | The COVID-19 pandemic has had a significant impact on many lives and the economies of many countries since late December 2019. Early detection with high accuracy is essential to help break the chain of transmission. Several radiological methodologies, such as CT scan and chest X-ray, have been employed in diagnosing and monitoring COVID-19 disease. Still, these methodologies are time-consuming and require trial and error. Machine learning techniques are currently being applied by several studies to deal with COVID-19. This study exploits the latent embeddings of variational autoencoders combined with ensemble techniques to propose three effective EVAE-Net models to detect COVID-19 disease. Two encoders are trained on chest X-ray images to generate two feature maps. The feature maps are concatenated and passed to either a combined or individual reparameterization phase to generate latent embeddings by sampling from a distribution. The latent embeddings are concatenated and passed to a classification head for classification. The COVID-19 Radiography Dataset from Kaggle is the source of chest X-ray images. The performances of the three models are evaluated. The proposed model shows satisfactory performance, with the best model achieving [Formula: see text] and [Formula: see text] accuracy on four classes and three classes, respectively. |
format | Online Article Text |
id | pubmed-9689048 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-96890482022-11-25 EVAE-Net: An Ensemble Variational Autoencoder Deep Learning Network for COVID-19 Classification Based on Chest X-ray Images Addo, Daniel Zhou, Shijie Jackson, Jehoiada Kofi Nneji, Grace Ugochi Monday, Happy Nkanta Sarpong, Kwabena Patamia, Rutherford Agbeshi Ekong, Favour Owusu-Agyei, Christyn Akosua Diagnostics (Basel) Article The COVID-19 pandemic has had a significant impact on many lives and the economies of many countries since late December 2019. Early detection with high accuracy is essential to help break the chain of transmission. Several radiological methodologies, such as CT scan and chest X-ray, have been employed in diagnosing and monitoring COVID-19 disease. Still, these methodologies are time-consuming and require trial and error. Machine learning techniques are currently being applied by several studies to deal with COVID-19. This study exploits the latent embeddings of variational autoencoders combined with ensemble techniques to propose three effective EVAE-Net models to detect COVID-19 disease. Two encoders are trained on chest X-ray images to generate two feature maps. The feature maps are concatenated and passed to either a combined or individual reparameterization phase to generate latent embeddings by sampling from a distribution. The latent embeddings are concatenated and passed to a classification head for classification. The COVID-19 Radiography Dataset from Kaggle is the source of chest X-ray images. The performances of the three models are evaluated. The proposed model shows satisfactory performance, with the best model achieving [Formula: see text] and [Formula: see text] accuracy on four classes and three classes, respectively. MDPI 2022-10-22 /pmc/articles/PMC9689048/ /pubmed/36359413 http://dx.doi.org/10.3390/diagnostics12112569 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Addo, Daniel Zhou, Shijie Jackson, Jehoiada Kofi Nneji, Grace Ugochi Monday, Happy Nkanta Sarpong, Kwabena Patamia, Rutherford Agbeshi Ekong, Favour Owusu-Agyei, Christyn Akosua EVAE-Net: An Ensemble Variational Autoencoder Deep Learning Network for COVID-19 Classification Based on Chest X-ray Images |
title | EVAE-Net: An Ensemble Variational Autoencoder Deep Learning Network for COVID-19 Classification Based on Chest X-ray Images |
title_full | EVAE-Net: An Ensemble Variational Autoencoder Deep Learning Network for COVID-19 Classification Based on Chest X-ray Images |
title_fullStr | EVAE-Net: An Ensemble Variational Autoencoder Deep Learning Network for COVID-19 Classification Based on Chest X-ray Images |
title_full_unstemmed | EVAE-Net: An Ensemble Variational Autoencoder Deep Learning Network for COVID-19 Classification Based on Chest X-ray Images |
title_short | EVAE-Net: An Ensemble Variational Autoencoder Deep Learning Network for COVID-19 Classification Based on Chest X-ray Images |
title_sort | evae-net: an ensemble variational autoencoder deep learning network for covid-19 classification based on chest x-ray images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9689048/ https://www.ncbi.nlm.nih.gov/pubmed/36359413 http://dx.doi.org/10.3390/diagnostics12112569 |
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