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HRU-Net: A Transfer Learning Method for Carotid Artery Plaque Segmentation in Ultrasound Images

Carotid artery stenotic plaque segmentation in ultrasound images is a crucial means for the analysis of plaque components and vulnerability. However, segmentation of severe stenotic plaques remains a challenging task because of the heterogeneities of inter-plaques and intra-plaques, and obscure boun...

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Autores principales: Yuan, Yanchao, Li, Cancheng, Zhang, Ke, Hua, Yang, Zhang, Jicong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9689104/
https://www.ncbi.nlm.nih.gov/pubmed/36428911
http://dx.doi.org/10.3390/diagnostics12112852
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author Yuan, Yanchao
Li, Cancheng
Zhang, Ke
Hua, Yang
Zhang, Jicong
author_facet Yuan, Yanchao
Li, Cancheng
Zhang, Ke
Hua, Yang
Zhang, Jicong
author_sort Yuan, Yanchao
collection PubMed
description Carotid artery stenotic plaque segmentation in ultrasound images is a crucial means for the analysis of plaque components and vulnerability. However, segmentation of severe stenotic plaques remains a challenging task because of the heterogeneities of inter-plaques and intra-plaques, and obscure boundaries of plaques. In this paper, we propose an automated HRU-Net transfer learning method for segmenting carotid plaques, using the limited images. The HRU-Net is based on the U-Net encoder–decoder paradigm, and cross-domain knowledge is transferred for plaque segmentation by fine-tuning the pretrained ResNet-50. Moreover, a cropped-blood-vessel image augmentation is customized for the plaque position constraint during training only. Moreover, hybrid atrous convolutions (HACs) are designed to derive diverse long-range dependences for refined plaque segmentation that are used on high-level semantic layers to exploit the implicit discrimination features. The experiments are performed on 115 images; Firstly, the 10-fold cross-validation, using 40 images with severe stenosis plaques, shows that the proposed method outperforms some of the state-of-the-art CNN-based methods on Dice, IoU, Acc, and modified Hausdorff distance (MHD) metrics; the improvements on metrics of Dice and MHD are statistically significant (p < 0.05). Furthermore, our HRU-Net transfer learning method shows fine generalization performance on 75 new images with varying degrees of plaque stenosis, and it may be used as an alternative for automatic noisy plaque segmentation in carotid ultrasound images clinically.
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spelling pubmed-96891042022-11-25 HRU-Net: A Transfer Learning Method for Carotid Artery Plaque Segmentation in Ultrasound Images Yuan, Yanchao Li, Cancheng Zhang, Ke Hua, Yang Zhang, Jicong Diagnostics (Basel) Article Carotid artery stenotic plaque segmentation in ultrasound images is a crucial means for the analysis of plaque components and vulnerability. However, segmentation of severe stenotic plaques remains a challenging task because of the heterogeneities of inter-plaques and intra-plaques, and obscure boundaries of plaques. In this paper, we propose an automated HRU-Net transfer learning method for segmenting carotid plaques, using the limited images. The HRU-Net is based on the U-Net encoder–decoder paradigm, and cross-domain knowledge is transferred for plaque segmentation by fine-tuning the pretrained ResNet-50. Moreover, a cropped-blood-vessel image augmentation is customized for the plaque position constraint during training only. Moreover, hybrid atrous convolutions (HACs) are designed to derive diverse long-range dependences for refined plaque segmentation that are used on high-level semantic layers to exploit the implicit discrimination features. The experiments are performed on 115 images; Firstly, the 10-fold cross-validation, using 40 images with severe stenosis plaques, shows that the proposed method outperforms some of the state-of-the-art CNN-based methods on Dice, IoU, Acc, and modified Hausdorff distance (MHD) metrics; the improvements on metrics of Dice and MHD are statistically significant (p < 0.05). Furthermore, our HRU-Net transfer learning method shows fine generalization performance on 75 new images with varying degrees of plaque stenosis, and it may be used as an alternative for automatic noisy plaque segmentation in carotid ultrasound images clinically. MDPI 2022-11-17 /pmc/articles/PMC9689104/ /pubmed/36428911 http://dx.doi.org/10.3390/diagnostics12112852 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Yuan, Yanchao
Li, Cancheng
Zhang, Ke
Hua, Yang
Zhang, Jicong
HRU-Net: A Transfer Learning Method for Carotid Artery Plaque Segmentation in Ultrasound Images
title HRU-Net: A Transfer Learning Method for Carotid Artery Plaque Segmentation in Ultrasound Images
title_full HRU-Net: A Transfer Learning Method for Carotid Artery Plaque Segmentation in Ultrasound Images
title_fullStr HRU-Net: A Transfer Learning Method for Carotid Artery Plaque Segmentation in Ultrasound Images
title_full_unstemmed HRU-Net: A Transfer Learning Method for Carotid Artery Plaque Segmentation in Ultrasound Images
title_short HRU-Net: A Transfer Learning Method for Carotid Artery Plaque Segmentation in Ultrasound Images
title_sort hru-net: a transfer learning method for carotid artery plaque segmentation in ultrasound images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9689104/
https://www.ncbi.nlm.nih.gov/pubmed/36428911
http://dx.doi.org/10.3390/diagnostics12112852
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