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Radiomics-Based Detection of COVID-19 from Chest X-ray Using Interpretable Soft Label-Driven TSK Fuzzy Classifier

The COVID-19 pandemic has posed a significant global public health threat with an escalating number of new cases and death toll daily. The early detection of COVID-related CXR abnormality potentially allows the early isolation of suspected cases. Chest X-Ray (CXR) is a fast and highly accessible ima...

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Autores principales: Zhang, Yuanpeng, Yang, Dongrong, Lam, Saikit, Li, Bing, Teng, Xinzhi, Zhang, Jiang, Zhou, Ta, Ma, Zongrui, Ying, Tin-Cheung (Michael), Cai, Jing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9689330/
https://www.ncbi.nlm.nih.gov/pubmed/36359456
http://dx.doi.org/10.3390/diagnostics12112613
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author Zhang, Yuanpeng
Yang, Dongrong
Lam, Saikit
Li, Bing
Teng, Xinzhi
Zhang, Jiang
Zhou, Ta
Ma, Zongrui
Ying, Tin-Cheung (Michael)
Cai, Jing
author_facet Zhang, Yuanpeng
Yang, Dongrong
Lam, Saikit
Li, Bing
Teng, Xinzhi
Zhang, Jiang
Zhou, Ta
Ma, Zongrui
Ying, Tin-Cheung (Michael)
Cai, Jing
author_sort Zhang, Yuanpeng
collection PubMed
description The COVID-19 pandemic has posed a significant global public health threat with an escalating number of new cases and death toll daily. The early detection of COVID-related CXR abnormality potentially allows the early isolation of suspected cases. Chest X-Ray (CXR) is a fast and highly accessible imaging modality. Recently, a number of CXR-based AI models have been developed for the automated detection of COVID-19. However, most existing models are difficult to interpret due to the use of incomprehensible deep features in their models. Confronted with this, we developed an interpretable TSK fuzzy system in this study for COVID-19 detection using radiomics features extracted from CXR images. There are two main contributions. (1) When TSK fuzzy systems are applied to classification tasks, the commonly used binary label matrix of training samples is transformed into a soft one in order to learn a more discriminant transformation matrix and hence improve classification accuracy. (2) Based on the assumption that the samples in the same class should be kept as close as possible when they are transformed into the label space, the compactness class graph is introduced to avoid overfitting caused by label matrix relaxation. Our proposed model for a multi-categorical classification task (COVID-19 vs. No-Findings vs. Pneumonia) was evaluated using 600 CXR images from publicly available datasets and compared against five state-of-the-art AI models in aspects of classification accuracy. Experimental findings showed that our model achieved classification accuracy of over 83%, which is better than the state-of-the-art models, while maintaining high interpretability.
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spelling pubmed-96893302022-11-25 Radiomics-Based Detection of COVID-19 from Chest X-ray Using Interpretable Soft Label-Driven TSK Fuzzy Classifier Zhang, Yuanpeng Yang, Dongrong Lam, Saikit Li, Bing Teng, Xinzhi Zhang, Jiang Zhou, Ta Ma, Zongrui Ying, Tin-Cheung (Michael) Cai, Jing Diagnostics (Basel) Article The COVID-19 pandemic has posed a significant global public health threat with an escalating number of new cases and death toll daily. The early detection of COVID-related CXR abnormality potentially allows the early isolation of suspected cases. Chest X-Ray (CXR) is a fast and highly accessible imaging modality. Recently, a number of CXR-based AI models have been developed for the automated detection of COVID-19. However, most existing models are difficult to interpret due to the use of incomprehensible deep features in their models. Confronted with this, we developed an interpretable TSK fuzzy system in this study for COVID-19 detection using radiomics features extracted from CXR images. There are two main contributions. (1) When TSK fuzzy systems are applied to classification tasks, the commonly used binary label matrix of training samples is transformed into a soft one in order to learn a more discriminant transformation matrix and hence improve classification accuracy. (2) Based on the assumption that the samples in the same class should be kept as close as possible when they are transformed into the label space, the compactness class graph is introduced to avoid overfitting caused by label matrix relaxation. Our proposed model for a multi-categorical classification task (COVID-19 vs. No-Findings vs. Pneumonia) was evaluated using 600 CXR images from publicly available datasets and compared against five state-of-the-art AI models in aspects of classification accuracy. Experimental findings showed that our model achieved classification accuracy of over 83%, which is better than the state-of-the-art models, while maintaining high interpretability. MDPI 2022-10-27 /pmc/articles/PMC9689330/ /pubmed/36359456 http://dx.doi.org/10.3390/diagnostics12112613 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhang, Yuanpeng
Yang, Dongrong
Lam, Saikit
Li, Bing
Teng, Xinzhi
Zhang, Jiang
Zhou, Ta
Ma, Zongrui
Ying, Tin-Cheung (Michael)
Cai, Jing
Radiomics-Based Detection of COVID-19 from Chest X-ray Using Interpretable Soft Label-Driven TSK Fuzzy Classifier
title Radiomics-Based Detection of COVID-19 from Chest X-ray Using Interpretable Soft Label-Driven TSK Fuzzy Classifier
title_full Radiomics-Based Detection of COVID-19 from Chest X-ray Using Interpretable Soft Label-Driven TSK Fuzzy Classifier
title_fullStr Radiomics-Based Detection of COVID-19 from Chest X-ray Using Interpretable Soft Label-Driven TSK Fuzzy Classifier
title_full_unstemmed Radiomics-Based Detection of COVID-19 from Chest X-ray Using Interpretable Soft Label-Driven TSK Fuzzy Classifier
title_short Radiomics-Based Detection of COVID-19 from Chest X-ray Using Interpretable Soft Label-Driven TSK Fuzzy Classifier
title_sort radiomics-based detection of covid-19 from chest x-ray using interpretable soft label-driven tsk fuzzy classifier
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9689330/
https://www.ncbi.nlm.nih.gov/pubmed/36359456
http://dx.doi.org/10.3390/diagnostics12112613
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