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Post-Mortem Interval and Microbiome Analysis through 16S rRNA Analysis: A Systematic Review

The determination of the Post-Mortem Interval (PMI) is an issue that has always represented a challenge in the field of forensic science. Different innovative approaches, compared to the more traditional ones, have been tried over the years, without succeeding in being validated as successful method...

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Autores principales: Tozzo, Pamela, Amico, Irene, Delicati, Arianna, Toselli, Federico, Caenazzo, Luciana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9689864/
https://www.ncbi.nlm.nih.gov/pubmed/36359484
http://dx.doi.org/10.3390/diagnostics12112641
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author Tozzo, Pamela
Amico, Irene
Delicati, Arianna
Toselli, Federico
Caenazzo, Luciana
author_facet Tozzo, Pamela
Amico, Irene
Delicati, Arianna
Toselli, Federico
Caenazzo, Luciana
author_sort Tozzo, Pamela
collection PubMed
description The determination of the Post-Mortem Interval (PMI) is an issue that has always represented a challenge in the field of forensic science. Different innovative approaches, compared to the more traditional ones, have been tried over the years, without succeeding in being validated as successful methods for PMI estimation. In the last two decades, innovations in sequencing technologies have made it possible to generate large volumes of data, allowing all members of a bacterial community to be sequenced. The aim of this manuscript is to provide a review regarding new advances in PMI estimation through cadaveric microbiota identification using 16S rRNA sequencing, in order to correlate specific microbiome profiles obtained from different body sites to PMI. The systematic review was performed according to PRISMA guidelines. For this purpose, 800 studies were identified through database searching (Pubmed). Articles that dealt with PMI estimation in correlation with microbiome composition and contained data about species, body site of sampling, monitoring time and sequencing method were selected and ultimately a total of 25 studies were considered. The selected studies evaluated the contribution of the various body sites to determine PMI, based on microbiome sequencing, in human and animal models. The results of this systematic review highlighted that studies conducted on both animals and humans yielded results that were promising. In order to fully exploit the potential of the microbiome in the estimation of PMI, it would be desirable to identify standardized body sampling sites and specific sampling methods in order to align data obtained by different research groups.
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spelling pubmed-96898642022-11-25 Post-Mortem Interval and Microbiome Analysis through 16S rRNA Analysis: A Systematic Review Tozzo, Pamela Amico, Irene Delicati, Arianna Toselli, Federico Caenazzo, Luciana Diagnostics (Basel) Systematic Review The determination of the Post-Mortem Interval (PMI) is an issue that has always represented a challenge in the field of forensic science. Different innovative approaches, compared to the more traditional ones, have been tried over the years, without succeeding in being validated as successful methods for PMI estimation. In the last two decades, innovations in sequencing technologies have made it possible to generate large volumes of data, allowing all members of a bacterial community to be sequenced. The aim of this manuscript is to provide a review regarding new advances in PMI estimation through cadaveric microbiota identification using 16S rRNA sequencing, in order to correlate specific microbiome profiles obtained from different body sites to PMI. The systematic review was performed according to PRISMA guidelines. For this purpose, 800 studies were identified through database searching (Pubmed). Articles that dealt with PMI estimation in correlation with microbiome composition and contained data about species, body site of sampling, monitoring time and sequencing method were selected and ultimately a total of 25 studies were considered. The selected studies evaluated the contribution of the various body sites to determine PMI, based on microbiome sequencing, in human and animal models. The results of this systematic review highlighted that studies conducted on both animals and humans yielded results that were promising. In order to fully exploit the potential of the microbiome in the estimation of PMI, it would be desirable to identify standardized body sampling sites and specific sampling methods in order to align data obtained by different research groups. MDPI 2022-10-31 /pmc/articles/PMC9689864/ /pubmed/36359484 http://dx.doi.org/10.3390/diagnostics12112641 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Systematic Review
Tozzo, Pamela
Amico, Irene
Delicati, Arianna
Toselli, Federico
Caenazzo, Luciana
Post-Mortem Interval and Microbiome Analysis through 16S rRNA Analysis: A Systematic Review
title Post-Mortem Interval and Microbiome Analysis through 16S rRNA Analysis: A Systematic Review
title_full Post-Mortem Interval and Microbiome Analysis through 16S rRNA Analysis: A Systematic Review
title_fullStr Post-Mortem Interval and Microbiome Analysis through 16S rRNA Analysis: A Systematic Review
title_full_unstemmed Post-Mortem Interval and Microbiome Analysis through 16S rRNA Analysis: A Systematic Review
title_short Post-Mortem Interval and Microbiome Analysis through 16S rRNA Analysis: A Systematic Review
title_sort post-mortem interval and microbiome analysis through 16s rrna analysis: a systematic review
topic Systematic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9689864/
https://www.ncbi.nlm.nih.gov/pubmed/36359484
http://dx.doi.org/10.3390/diagnostics12112641
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