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Genotyping of Coxiella burnetii from Cattle by Multispacer Sequence Typing and Multiple Locus Variable Number of Tandem Repeat Analysis in the Republic of Korea

Genotyping of Coxiella burnetii using multispacer sequence typing (MST) and multiple locus variable number tandem repeat analysis (MLVA) was conducted from infected animals for the first time in the Republic of Korea. C. burnetii was detected by real-time PCR, and followed by MST and MLVA genotyping...

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Autores principales: Truong, A-Tai, Youn, So Youn, Yoo, Mi-Sun, Lim, Ji-Yeon, Yoon, Soon-Seek, Cho, Yun Sang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9689931/
https://www.ncbi.nlm.nih.gov/pubmed/36360164
http://dx.doi.org/10.3390/genes13111927
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author Truong, A-Tai
Youn, So Youn
Yoo, Mi-Sun
Lim, Ji-Yeon
Yoon, Soon-Seek
Cho, Yun Sang
author_facet Truong, A-Tai
Youn, So Youn
Yoo, Mi-Sun
Lim, Ji-Yeon
Yoon, Soon-Seek
Cho, Yun Sang
author_sort Truong, A-Tai
collection PubMed
description Genotyping of Coxiella burnetii using multispacer sequence typing (MST) and multiple locus variable number tandem repeat analysis (MLVA) was conducted from infected animals for the first time in the Republic of Korea. C. burnetii was detected by real-time PCR, and followed by MST and MLVA genotyping. The result showed that detected C. burnetii all had the same MLVA genotype, 6-13-2-7-9-10 for markers MS23-MS24-MS27-MS28-MS33-MS34, respectively, and genotype group 61 for MST. The same genotypes were previously identified in Poland. Importantly, this MLVA type was detected in humans in France, suggesting that the Korean strain can also potentially cause Q fever in humans. MST and MLVA were very useful tools for analyzing the molecular epidemiology of C. burnetii and helpful for interpreting the epidemiological relationship between isolates from domestic and international resources.
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spelling pubmed-96899312022-11-25 Genotyping of Coxiella burnetii from Cattle by Multispacer Sequence Typing and Multiple Locus Variable Number of Tandem Repeat Analysis in the Republic of Korea Truong, A-Tai Youn, So Youn Yoo, Mi-Sun Lim, Ji-Yeon Yoon, Soon-Seek Cho, Yun Sang Genes (Basel) Communication Genotyping of Coxiella burnetii using multispacer sequence typing (MST) and multiple locus variable number tandem repeat analysis (MLVA) was conducted from infected animals for the first time in the Republic of Korea. C. burnetii was detected by real-time PCR, and followed by MST and MLVA genotyping. The result showed that detected C. burnetii all had the same MLVA genotype, 6-13-2-7-9-10 for markers MS23-MS24-MS27-MS28-MS33-MS34, respectively, and genotype group 61 for MST. The same genotypes were previously identified in Poland. Importantly, this MLVA type was detected in humans in France, suggesting that the Korean strain can also potentially cause Q fever in humans. MST and MLVA were very useful tools for analyzing the molecular epidemiology of C. burnetii and helpful for interpreting the epidemiological relationship between isolates from domestic and international resources. MDPI 2022-10-23 /pmc/articles/PMC9689931/ /pubmed/36360164 http://dx.doi.org/10.3390/genes13111927 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Truong, A-Tai
Youn, So Youn
Yoo, Mi-Sun
Lim, Ji-Yeon
Yoon, Soon-Seek
Cho, Yun Sang
Genotyping of Coxiella burnetii from Cattle by Multispacer Sequence Typing and Multiple Locus Variable Number of Tandem Repeat Analysis in the Republic of Korea
title Genotyping of Coxiella burnetii from Cattle by Multispacer Sequence Typing and Multiple Locus Variable Number of Tandem Repeat Analysis in the Republic of Korea
title_full Genotyping of Coxiella burnetii from Cattle by Multispacer Sequence Typing and Multiple Locus Variable Number of Tandem Repeat Analysis in the Republic of Korea
title_fullStr Genotyping of Coxiella burnetii from Cattle by Multispacer Sequence Typing and Multiple Locus Variable Number of Tandem Repeat Analysis in the Republic of Korea
title_full_unstemmed Genotyping of Coxiella burnetii from Cattle by Multispacer Sequence Typing and Multiple Locus Variable Number of Tandem Repeat Analysis in the Republic of Korea
title_short Genotyping of Coxiella burnetii from Cattle by Multispacer Sequence Typing and Multiple Locus Variable Number of Tandem Repeat Analysis in the Republic of Korea
title_sort genotyping of coxiella burnetii from cattle by multispacer sequence typing and multiple locus variable number of tandem repeat analysis in the republic of korea
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9689931/
https://www.ncbi.nlm.nih.gov/pubmed/36360164
http://dx.doi.org/10.3390/genes13111927
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