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Predicting Eye and Hair Color in a Turkish Population Using the HIrisPlex System
Forensic DNA Phenotyping (FDP) can reveal the appearance of an unknown individual by predicting the ancestry, phenotype (i.e., hair, eye, skin color), and age from DNA obtained at the crime scene. The HIrisPlex system has been developed to simultaneously predict eye and hair color. However, the pred...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9690125/ https://www.ncbi.nlm.nih.gov/pubmed/36421769 http://dx.doi.org/10.3390/genes13112094 |
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author | Sari O, Ilksen Simsek, Sumeyye Zulal Filoglu, Gonul Bulbul, Ozlem |
author_facet | Sari O, Ilksen Simsek, Sumeyye Zulal Filoglu, Gonul Bulbul, Ozlem |
author_sort | Sari O, Ilksen |
collection | PubMed |
description | Forensic DNA Phenotyping (FDP) can reveal the appearance of an unknown individual by predicting the ancestry, phenotype (i.e., hair, eye, skin color), and age from DNA obtained at the crime scene. The HIrisPlex system has been developed to simultaneously predict eye and hair color. However, the prediction accuracy of the system needs to be assessed for the tested population before implementing FDP in casework. In this study, we evaluated the performance of the HIrisPlex system on 149 individuals from the Turkish population. We applied the single-based extension (SNaPshot chemistry) method and used the HIrisPlex online tool to test the prediction of the eye and hair colors. The accuracy of the HIrisPlex system was assessed through the calculation of the area under the receiver characteristic operating curves (AUC), sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV). The results showed that the proposed method successfully predicted the eye and hair color, especially for blue (100%) and brown (95.60%) eye and black (95.23) and brown (98.94) hair colors. As observed in previous studies, the system failed to predict intermediate eye color, representing 25% in our cohort. The majority of incorrect predictions were observed for blond hair color (40.7%). Previous HIrisPlex studies have also noted difficulties with these phenotypes. Our study shows that the HIrisPlex system can be applied to forensic casework in Turkey with careful interpretation of the data, particularly intermediate eye color and blond hair color. |
format | Online Article Text |
id | pubmed-9690125 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-96901252022-11-25 Predicting Eye and Hair Color in a Turkish Population Using the HIrisPlex System Sari O, Ilksen Simsek, Sumeyye Zulal Filoglu, Gonul Bulbul, Ozlem Genes (Basel) Article Forensic DNA Phenotyping (FDP) can reveal the appearance of an unknown individual by predicting the ancestry, phenotype (i.e., hair, eye, skin color), and age from DNA obtained at the crime scene. The HIrisPlex system has been developed to simultaneously predict eye and hair color. However, the prediction accuracy of the system needs to be assessed for the tested population before implementing FDP in casework. In this study, we evaluated the performance of the HIrisPlex system on 149 individuals from the Turkish population. We applied the single-based extension (SNaPshot chemistry) method and used the HIrisPlex online tool to test the prediction of the eye and hair colors. The accuracy of the HIrisPlex system was assessed through the calculation of the area under the receiver characteristic operating curves (AUC), sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV). The results showed that the proposed method successfully predicted the eye and hair color, especially for blue (100%) and brown (95.60%) eye and black (95.23) and brown (98.94) hair colors. As observed in previous studies, the system failed to predict intermediate eye color, representing 25% in our cohort. The majority of incorrect predictions were observed for blond hair color (40.7%). Previous HIrisPlex studies have also noted difficulties with these phenotypes. Our study shows that the HIrisPlex system can be applied to forensic casework in Turkey with careful interpretation of the data, particularly intermediate eye color and blond hair color. MDPI 2022-11-11 /pmc/articles/PMC9690125/ /pubmed/36421769 http://dx.doi.org/10.3390/genes13112094 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Sari O, Ilksen Simsek, Sumeyye Zulal Filoglu, Gonul Bulbul, Ozlem Predicting Eye and Hair Color in a Turkish Population Using the HIrisPlex System |
title | Predicting Eye and Hair Color in a Turkish Population Using the HIrisPlex System |
title_full | Predicting Eye and Hair Color in a Turkish Population Using the HIrisPlex System |
title_fullStr | Predicting Eye and Hair Color in a Turkish Population Using the HIrisPlex System |
title_full_unstemmed | Predicting Eye and Hair Color in a Turkish Population Using the HIrisPlex System |
title_short | Predicting Eye and Hair Color in a Turkish Population Using the HIrisPlex System |
title_sort | predicting eye and hair color in a turkish population using the hirisplex system |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9690125/ https://www.ncbi.nlm.nih.gov/pubmed/36421769 http://dx.doi.org/10.3390/genes13112094 |
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