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Predicting Eye and Hair Color in a Turkish Population Using the HIrisPlex System

Forensic DNA Phenotyping (FDP) can reveal the appearance of an unknown individual by predicting the ancestry, phenotype (i.e., hair, eye, skin color), and age from DNA obtained at the crime scene. The HIrisPlex system has been developed to simultaneously predict eye and hair color. However, the pred...

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Autores principales: Sari O, Ilksen, Simsek, Sumeyye Zulal, Filoglu, Gonul, Bulbul, Ozlem
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9690125/
https://www.ncbi.nlm.nih.gov/pubmed/36421769
http://dx.doi.org/10.3390/genes13112094
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author Sari O, Ilksen
Simsek, Sumeyye Zulal
Filoglu, Gonul
Bulbul, Ozlem
author_facet Sari O, Ilksen
Simsek, Sumeyye Zulal
Filoglu, Gonul
Bulbul, Ozlem
author_sort Sari O, Ilksen
collection PubMed
description Forensic DNA Phenotyping (FDP) can reveal the appearance of an unknown individual by predicting the ancestry, phenotype (i.e., hair, eye, skin color), and age from DNA obtained at the crime scene. The HIrisPlex system has been developed to simultaneously predict eye and hair color. However, the prediction accuracy of the system needs to be assessed for the tested population before implementing FDP in casework. In this study, we evaluated the performance of the HIrisPlex system on 149 individuals from the Turkish population. We applied the single-based extension (SNaPshot chemistry) method and used the HIrisPlex online tool to test the prediction of the eye and hair colors. The accuracy of the HIrisPlex system was assessed through the calculation of the area under the receiver characteristic operating curves (AUC), sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV). The results showed that the proposed method successfully predicted the eye and hair color, especially for blue (100%) and brown (95.60%) eye and black (95.23) and brown (98.94) hair colors. As observed in previous studies, the system failed to predict intermediate eye color, representing 25% in our cohort. The majority of incorrect predictions were observed for blond hair color (40.7%). Previous HIrisPlex studies have also noted difficulties with these phenotypes. Our study shows that the HIrisPlex system can be applied to forensic casework in Turkey with careful interpretation of the data, particularly intermediate eye color and blond hair color.
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spelling pubmed-96901252022-11-25 Predicting Eye and Hair Color in a Turkish Population Using the HIrisPlex System Sari O, Ilksen Simsek, Sumeyye Zulal Filoglu, Gonul Bulbul, Ozlem Genes (Basel) Article Forensic DNA Phenotyping (FDP) can reveal the appearance of an unknown individual by predicting the ancestry, phenotype (i.e., hair, eye, skin color), and age from DNA obtained at the crime scene. The HIrisPlex system has been developed to simultaneously predict eye and hair color. However, the prediction accuracy of the system needs to be assessed for the tested population before implementing FDP in casework. In this study, we evaluated the performance of the HIrisPlex system on 149 individuals from the Turkish population. We applied the single-based extension (SNaPshot chemistry) method and used the HIrisPlex online tool to test the prediction of the eye and hair colors. The accuracy of the HIrisPlex system was assessed through the calculation of the area under the receiver characteristic operating curves (AUC), sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV). The results showed that the proposed method successfully predicted the eye and hair color, especially for blue (100%) and brown (95.60%) eye and black (95.23) and brown (98.94) hair colors. As observed in previous studies, the system failed to predict intermediate eye color, representing 25% in our cohort. The majority of incorrect predictions were observed for blond hair color (40.7%). Previous HIrisPlex studies have also noted difficulties with these phenotypes. Our study shows that the HIrisPlex system can be applied to forensic casework in Turkey with careful interpretation of the data, particularly intermediate eye color and blond hair color. MDPI 2022-11-11 /pmc/articles/PMC9690125/ /pubmed/36421769 http://dx.doi.org/10.3390/genes13112094 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Sari O, Ilksen
Simsek, Sumeyye Zulal
Filoglu, Gonul
Bulbul, Ozlem
Predicting Eye and Hair Color in a Turkish Population Using the HIrisPlex System
title Predicting Eye and Hair Color in a Turkish Population Using the HIrisPlex System
title_full Predicting Eye and Hair Color in a Turkish Population Using the HIrisPlex System
title_fullStr Predicting Eye and Hair Color in a Turkish Population Using the HIrisPlex System
title_full_unstemmed Predicting Eye and Hair Color in a Turkish Population Using the HIrisPlex System
title_short Predicting Eye and Hair Color in a Turkish Population Using the HIrisPlex System
title_sort predicting eye and hair color in a turkish population using the hirisplex system
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9690125/
https://www.ncbi.nlm.nih.gov/pubmed/36421769
http://dx.doi.org/10.3390/genes13112094
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