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Genome Mining Reveals High Biosynthetic Potential of Biocontrol Agent Bacillus velezensis B.BV10

The present study demonstrates the biocontrol potential of a plant growth-promoting bacterial strain using three different approaches: (i) an in vitro evaluation of antagonistic activity against important phytopathogenic fungi; (ii) an evaluation under greenhouse conditions with strawberry plants to...

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Autores principales: Bertê, Rosiana, Teixeira, Gustavo Manoel, de Oliveira, João Paulo, Nicoletto, Maria Luiza Abreu, da Silva, Daniel Vieira, de Godoy, Guilherme Gonçalves, Sanches, Danilo Sipoli, de Resende, Juliano Tadeu Vilela, Pereira, Ulisses de Padua, Nunes da Rocha, Ulisses, de Oliveira, Admilton Gonçalves
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9690179/
https://www.ncbi.nlm.nih.gov/pubmed/36360221
http://dx.doi.org/10.3390/genes13111984
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author Bertê, Rosiana
Teixeira, Gustavo Manoel
de Oliveira, João Paulo
Nicoletto, Maria Luiza Abreu
da Silva, Daniel Vieira
de Godoy, Guilherme Gonçalves
Sanches, Danilo Sipoli
de Resende, Juliano Tadeu Vilela
Pereira, Ulisses de Padua
Nunes da Rocha, Ulisses
de Oliveira, Admilton Gonçalves
author_facet Bertê, Rosiana
Teixeira, Gustavo Manoel
de Oliveira, João Paulo
Nicoletto, Maria Luiza Abreu
da Silva, Daniel Vieira
de Godoy, Guilherme Gonçalves
Sanches, Danilo Sipoli
de Resende, Juliano Tadeu Vilela
Pereira, Ulisses de Padua
Nunes da Rocha, Ulisses
de Oliveira, Admilton Gonçalves
author_sort Bertê, Rosiana
collection PubMed
description The present study demonstrates the biocontrol potential of a plant growth-promoting bacterial strain using three different approaches: (i) an in vitro evaluation of antagonistic activity against important phytopathogenic fungi; (ii) an evaluation under greenhouse conditions with strawberry plants to assess the control of gray mold; and (iii) an in silico whole genome sequence mining to assign genetic features such as gene clusters or isolated genes to the strain activity. The in vitro assay showed that the B.BV10 strain presented antagonistic activity, inhibiting the mycelial growth in all the phytopathogenic fungi evaluated. The application of the Bacillus velezensis strain B.BV10 under greenhouse conditions reduced the presence of Botrytis cinerea and increased the mean fruit biomass. The genome of B.BV10 was estimated at 3,917,533 bp, with a GC content of 46.6% and 4088 coding DNA sequences, and was identified as B. velezensis. Biosynthetic gene clusters related to the synthesis of the molecules with antifungal activity were found in its genome. Genes related to the regulation/formation of biofilms, motility, and the important properties for the rhizospheric colonization were also found in the genome. The current study offers a comprehensive understanding of the genomic architecture and control activity of phytopathogenic fungi by the B. velezensis strain B.BV10 that may substantiate the industrialization of this strain in the future.
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spelling pubmed-96901792022-11-25 Genome Mining Reveals High Biosynthetic Potential of Biocontrol Agent Bacillus velezensis B.BV10 Bertê, Rosiana Teixeira, Gustavo Manoel de Oliveira, João Paulo Nicoletto, Maria Luiza Abreu da Silva, Daniel Vieira de Godoy, Guilherme Gonçalves Sanches, Danilo Sipoli de Resende, Juliano Tadeu Vilela Pereira, Ulisses de Padua Nunes da Rocha, Ulisses de Oliveira, Admilton Gonçalves Genes (Basel) Article The present study demonstrates the biocontrol potential of a plant growth-promoting bacterial strain using three different approaches: (i) an in vitro evaluation of antagonistic activity against important phytopathogenic fungi; (ii) an evaluation under greenhouse conditions with strawberry plants to assess the control of gray mold; and (iii) an in silico whole genome sequence mining to assign genetic features such as gene clusters or isolated genes to the strain activity. The in vitro assay showed that the B.BV10 strain presented antagonistic activity, inhibiting the mycelial growth in all the phytopathogenic fungi evaluated. The application of the Bacillus velezensis strain B.BV10 under greenhouse conditions reduced the presence of Botrytis cinerea and increased the mean fruit biomass. The genome of B.BV10 was estimated at 3,917,533 bp, with a GC content of 46.6% and 4088 coding DNA sequences, and was identified as B. velezensis. Biosynthetic gene clusters related to the synthesis of the molecules with antifungal activity were found in its genome. Genes related to the regulation/formation of biofilms, motility, and the important properties for the rhizospheric colonization were also found in the genome. The current study offers a comprehensive understanding of the genomic architecture and control activity of phytopathogenic fungi by the B. velezensis strain B.BV10 that may substantiate the industrialization of this strain in the future. MDPI 2022-10-30 /pmc/articles/PMC9690179/ /pubmed/36360221 http://dx.doi.org/10.3390/genes13111984 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Bertê, Rosiana
Teixeira, Gustavo Manoel
de Oliveira, João Paulo
Nicoletto, Maria Luiza Abreu
da Silva, Daniel Vieira
de Godoy, Guilherme Gonçalves
Sanches, Danilo Sipoli
de Resende, Juliano Tadeu Vilela
Pereira, Ulisses de Padua
Nunes da Rocha, Ulisses
de Oliveira, Admilton Gonçalves
Genome Mining Reveals High Biosynthetic Potential of Biocontrol Agent Bacillus velezensis B.BV10
title Genome Mining Reveals High Biosynthetic Potential of Biocontrol Agent Bacillus velezensis B.BV10
title_full Genome Mining Reveals High Biosynthetic Potential of Biocontrol Agent Bacillus velezensis B.BV10
title_fullStr Genome Mining Reveals High Biosynthetic Potential of Biocontrol Agent Bacillus velezensis B.BV10
title_full_unstemmed Genome Mining Reveals High Biosynthetic Potential of Biocontrol Agent Bacillus velezensis B.BV10
title_short Genome Mining Reveals High Biosynthetic Potential of Biocontrol Agent Bacillus velezensis B.BV10
title_sort genome mining reveals high biosynthetic potential of biocontrol agent bacillus velezensis b.bv10
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9690179/
https://www.ncbi.nlm.nih.gov/pubmed/36360221
http://dx.doi.org/10.3390/genes13111984
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