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Estimation of Nuclear DNA Content in Some Aegilops Species: Best Analyzed Using Flow Cytometry

The genera Triticum and Aegilops have been considered as the main gene pool of wheat due to their features, such as tolerance of all types of abiotic and biotic stresses. This study was conducted to evaluate the cytogenetic analyses in 115 native and wild populations from eleven Aegilops species usi...

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Autores principales: Najafi, Solmaz, Ulker, Mehmet, Oral, Erol, Tuncturk, Ruveyde, Tuncturk, Murat, Sayyed, R. Z., Perveen, Kahkashan, Poczai, Peter, Cseh, Andras
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9690501/
https://www.ncbi.nlm.nih.gov/pubmed/36360216
http://dx.doi.org/10.3390/genes13111980
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author Najafi, Solmaz
Ulker, Mehmet
Oral, Erol
Tuncturk, Ruveyde
Tuncturk, Murat
Sayyed, R. Z.
Perveen, Kahkashan
Poczai, Peter
Cseh, Andras
author_facet Najafi, Solmaz
Ulker, Mehmet
Oral, Erol
Tuncturk, Ruveyde
Tuncturk, Murat
Sayyed, R. Z.
Perveen, Kahkashan
Poczai, Peter
Cseh, Andras
author_sort Najafi, Solmaz
collection PubMed
description The genera Triticum and Aegilops have been considered as the main gene pool of wheat due to their features, such as tolerance of all types of abiotic and biotic stresses. This study was conducted to evaluate the cytogenetic analyses in 115 native and wild populations from eleven Aegilops species using their nuclear DNA quantification. Mean 2C nuclear DNA contents of different ploidy levels in the wild wheat of Turkey and Iran were measured using the flow cytometry technique. The obtained results showed that the mean nuclear DNA content in diploid species varied from 10.09 pg/2C (Ae. umbellulata) to 10.95 pg/2C (Ae. speltoides var. ligustica) in Turkey. In Iranian diploids, the mean nuclear DNA content varied from 10.20 pg/2C (Ae. taushii) to 11.56 pg/2C (Ae. speltoides var. ligustica). This index in the tetraploid species of Turkey varied from 18.09 pg/2C (Ae. cylindrica) to 21.65 pg/2C (Ae. triaristata), and in Iranian species, it was from 18.61 pg/2C (Ae. cylindrica) to 21.75 pg/2C (Ae. columnaris). On the other hand, in the hexaploid species of Turkey, this index varied from 31.59 pg/2C (Ae. crassa) to 31.81 pg/2C (Ae. cylindrica); in the Iranian species, it varied from 32.58 pg/2C (Ae. cylindrica) to 33.97 pg/2C (Ae. crassa). There was a significant difference in the DNA content of Turkey and Iran diploid as well as tetraploid species; however, in hexaploid species, the difference was not significant. It was concluded that the variation in intraspecific genome size was very low in diploid and tetraploid populations; this means that the low variation is not dependent on geographic and climatic parameters. On the other hand, the interspecific variation is significant at the diploid and tetraploid populations. It is generally very difficult to distinguish Aegilops species from each other in natural conditions; meanwhile, in this study, all species could be, easily, quickly and unambiguously, distinguished and separated using the FCM technique.
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spelling pubmed-96905012022-11-25 Estimation of Nuclear DNA Content in Some Aegilops Species: Best Analyzed Using Flow Cytometry Najafi, Solmaz Ulker, Mehmet Oral, Erol Tuncturk, Ruveyde Tuncturk, Murat Sayyed, R. Z. Perveen, Kahkashan Poczai, Peter Cseh, Andras Genes (Basel) Article The genera Triticum and Aegilops have been considered as the main gene pool of wheat due to their features, such as tolerance of all types of abiotic and biotic stresses. This study was conducted to evaluate the cytogenetic analyses in 115 native and wild populations from eleven Aegilops species using their nuclear DNA quantification. Mean 2C nuclear DNA contents of different ploidy levels in the wild wheat of Turkey and Iran were measured using the flow cytometry technique. The obtained results showed that the mean nuclear DNA content in diploid species varied from 10.09 pg/2C (Ae. umbellulata) to 10.95 pg/2C (Ae. speltoides var. ligustica) in Turkey. In Iranian diploids, the mean nuclear DNA content varied from 10.20 pg/2C (Ae. taushii) to 11.56 pg/2C (Ae. speltoides var. ligustica). This index in the tetraploid species of Turkey varied from 18.09 pg/2C (Ae. cylindrica) to 21.65 pg/2C (Ae. triaristata), and in Iranian species, it was from 18.61 pg/2C (Ae. cylindrica) to 21.75 pg/2C (Ae. columnaris). On the other hand, in the hexaploid species of Turkey, this index varied from 31.59 pg/2C (Ae. crassa) to 31.81 pg/2C (Ae. cylindrica); in the Iranian species, it varied from 32.58 pg/2C (Ae. cylindrica) to 33.97 pg/2C (Ae. crassa). There was a significant difference in the DNA content of Turkey and Iran diploid as well as tetraploid species; however, in hexaploid species, the difference was not significant. It was concluded that the variation in intraspecific genome size was very low in diploid and tetraploid populations; this means that the low variation is not dependent on geographic and climatic parameters. On the other hand, the interspecific variation is significant at the diploid and tetraploid populations. It is generally very difficult to distinguish Aegilops species from each other in natural conditions; meanwhile, in this study, all species could be, easily, quickly and unambiguously, distinguished and separated using the FCM technique. MDPI 2022-10-29 /pmc/articles/PMC9690501/ /pubmed/36360216 http://dx.doi.org/10.3390/genes13111980 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Najafi, Solmaz
Ulker, Mehmet
Oral, Erol
Tuncturk, Ruveyde
Tuncturk, Murat
Sayyed, R. Z.
Perveen, Kahkashan
Poczai, Peter
Cseh, Andras
Estimation of Nuclear DNA Content in Some Aegilops Species: Best Analyzed Using Flow Cytometry
title Estimation of Nuclear DNA Content in Some Aegilops Species: Best Analyzed Using Flow Cytometry
title_full Estimation of Nuclear DNA Content in Some Aegilops Species: Best Analyzed Using Flow Cytometry
title_fullStr Estimation of Nuclear DNA Content in Some Aegilops Species: Best Analyzed Using Flow Cytometry
title_full_unstemmed Estimation of Nuclear DNA Content in Some Aegilops Species: Best Analyzed Using Flow Cytometry
title_short Estimation of Nuclear DNA Content in Some Aegilops Species: Best Analyzed Using Flow Cytometry
title_sort estimation of nuclear dna content in some aegilops species: best analyzed using flow cytometry
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9690501/
https://www.ncbi.nlm.nih.gov/pubmed/36360216
http://dx.doi.org/10.3390/genes13111980
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