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Complete Mitogenome of Oreolalax omeimontis Reveals Phylogenetic Status and Novel Gene Arrangement of Archaeobatrachia

Species of the genus Oreolalax displayed crucial morphological characteristics of vertebrates transitioning from aquatic to terrestrial habitats; thus, they can be regarded as a representative vertebrate genus for this landing phenomenon. But the present phylogenetic status of Oreolalax omeimontis h...

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Autores principales: Luo, Hongdi, Cui, Lin, Han, Fuyao, He, Zhi, Fan, Xiaolan, Zeng, Bo, Yang, Mingyao, Yang, Deying, Ni, Qingyong, Li, Yan, Yao, Yongfang, Xu, Huailiang, Yang, Jiandong, Wei, Zhimin, Li, Tongqing, Rao, Dingqi, Yan, Taiming, Zhang, Mingwang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9691213/
https://www.ncbi.nlm.nih.gov/pubmed/36360325
http://dx.doi.org/10.3390/genes13112089
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author Luo, Hongdi
Cui, Lin
Han, Fuyao
He, Zhi
Fan, Xiaolan
Zeng, Bo
Yang, Mingyao
Yang, Deying
Ni, Qingyong
Li, Yan
Yao, Yongfang
Xu, Huailiang
Yang, Jiandong
Wei, Zhimin
Li, Tongqing
Rao, Dingqi
Yan, Taiming
Zhang, Mingwang
author_facet Luo, Hongdi
Cui, Lin
Han, Fuyao
He, Zhi
Fan, Xiaolan
Zeng, Bo
Yang, Mingyao
Yang, Deying
Ni, Qingyong
Li, Yan
Yao, Yongfang
Xu, Huailiang
Yang, Jiandong
Wei, Zhimin
Li, Tongqing
Rao, Dingqi
Yan, Taiming
Zhang, Mingwang
author_sort Luo, Hongdi
collection PubMed
description Species of the genus Oreolalax displayed crucial morphological characteristics of vertebrates transitioning from aquatic to terrestrial habitats; thus, they can be regarded as a representative vertebrate genus for this landing phenomenon. But the present phylogenetic status of Oreolalax omeimontis has been controversial with morphological and molecular approaches, and specific gene rearrangements were discovered in all six published Oreolalax mitogenomes, which are rarely observed in Archaeobatrachia. Therefore, this study determined the complete mitogenome of O. omeimontis with the aim of identifying its precise phylogenetic position and novel gene arrangement in Archaeobatrachia. Phylogenetic analysis with Bayesian inference and maximum likelihood indicates O. omeimontis is a sister group to O. lichuanensis, which is consistent with previous phylogenetic analysis based on morphological characteristics, but contrasts with other studies using multiple gene fragments. Moreover, although the duplication of trnM occurred in all seven Oreolalax species, the translocation of trnQ and trnM occurred differently in O. omeimontis to the other six, and this unique rearrangement would happen after the speciation of O. omeimontis. In general, this study sheds new light on the phylogenetic relationships and gene rearrangements of Archaeobatrachia.
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spelling pubmed-96912132022-11-25 Complete Mitogenome of Oreolalax omeimontis Reveals Phylogenetic Status and Novel Gene Arrangement of Archaeobatrachia Luo, Hongdi Cui, Lin Han, Fuyao He, Zhi Fan, Xiaolan Zeng, Bo Yang, Mingyao Yang, Deying Ni, Qingyong Li, Yan Yao, Yongfang Xu, Huailiang Yang, Jiandong Wei, Zhimin Li, Tongqing Rao, Dingqi Yan, Taiming Zhang, Mingwang Genes (Basel) Article Species of the genus Oreolalax displayed crucial morphological characteristics of vertebrates transitioning from aquatic to terrestrial habitats; thus, they can be regarded as a representative vertebrate genus for this landing phenomenon. But the present phylogenetic status of Oreolalax omeimontis has been controversial with morphological and molecular approaches, and specific gene rearrangements were discovered in all six published Oreolalax mitogenomes, which are rarely observed in Archaeobatrachia. Therefore, this study determined the complete mitogenome of O. omeimontis with the aim of identifying its precise phylogenetic position and novel gene arrangement in Archaeobatrachia. Phylogenetic analysis with Bayesian inference and maximum likelihood indicates O. omeimontis is a sister group to O. lichuanensis, which is consistent with previous phylogenetic analysis based on morphological characteristics, but contrasts with other studies using multiple gene fragments. Moreover, although the duplication of trnM occurred in all seven Oreolalax species, the translocation of trnQ and trnM occurred differently in O. omeimontis to the other six, and this unique rearrangement would happen after the speciation of O. omeimontis. In general, this study sheds new light on the phylogenetic relationships and gene rearrangements of Archaeobatrachia. MDPI 2022-11-10 /pmc/articles/PMC9691213/ /pubmed/36360325 http://dx.doi.org/10.3390/genes13112089 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Luo, Hongdi
Cui, Lin
Han, Fuyao
He, Zhi
Fan, Xiaolan
Zeng, Bo
Yang, Mingyao
Yang, Deying
Ni, Qingyong
Li, Yan
Yao, Yongfang
Xu, Huailiang
Yang, Jiandong
Wei, Zhimin
Li, Tongqing
Rao, Dingqi
Yan, Taiming
Zhang, Mingwang
Complete Mitogenome of Oreolalax omeimontis Reveals Phylogenetic Status and Novel Gene Arrangement of Archaeobatrachia
title Complete Mitogenome of Oreolalax omeimontis Reveals Phylogenetic Status and Novel Gene Arrangement of Archaeobatrachia
title_full Complete Mitogenome of Oreolalax omeimontis Reveals Phylogenetic Status and Novel Gene Arrangement of Archaeobatrachia
title_fullStr Complete Mitogenome of Oreolalax omeimontis Reveals Phylogenetic Status and Novel Gene Arrangement of Archaeobatrachia
title_full_unstemmed Complete Mitogenome of Oreolalax omeimontis Reveals Phylogenetic Status and Novel Gene Arrangement of Archaeobatrachia
title_short Complete Mitogenome of Oreolalax omeimontis Reveals Phylogenetic Status and Novel Gene Arrangement of Archaeobatrachia
title_sort complete mitogenome of oreolalax omeimontis reveals phylogenetic status and novel gene arrangement of archaeobatrachia
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9691213/
https://www.ncbi.nlm.nih.gov/pubmed/36360325
http://dx.doi.org/10.3390/genes13112089
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