Cargando…
Inferring Therapeutic Targets in Candida albicans and Possible Inhibition through Natural Products: A Binding and Physiological Based Pharmacokinetics Snapshot
Despite being responsible for invasive infections, fungal pathogens have been underrepresented in computer aided therapeutic target mining and drug design. Excess of Candida albicans causes candidiasis, causative of thrush and vaginal infection due to off-balance. In this study, we attempted to mine...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9692583/ https://www.ncbi.nlm.nih.gov/pubmed/36362898 http://dx.doi.org/10.3390/life12111743 |
_version_ | 1784837303555850240 |
---|---|
author | Basharat, Zarrin Khan, Kanwal Jalal, Khurshid Alnasser, Sulaiman Mohammed Majeed, Sania Zehra, Marium |
author_facet | Basharat, Zarrin Khan, Kanwal Jalal, Khurshid Alnasser, Sulaiman Mohammed Majeed, Sania Zehra, Marium |
author_sort | Basharat, Zarrin |
collection | PubMed |
description | Despite being responsible for invasive infections, fungal pathogens have been underrepresented in computer aided therapeutic target mining and drug design. Excess of Candida albicans causes candidiasis, causative of thrush and vaginal infection due to off-balance. In this study, we attempted to mine drug targets (n = 46) using a subtractive proteomic approach in this pathogenic yeast and screen natural products with inhibition potential against fructose-bisphosphate aldolase (FBA) of the C. albicans. The top compound selected on the basis of best docking score from traditional Indian medicine/Ayurvedic library was (4-Hydroxybenzyl)thiocarbamic acid, from the ZINC FBA inhibitor library was ZINC13507461 (IUPAC name: [(2R)-2-hydroxy-3-phosphonooxypropyl] (9E,12E)-octadeca-9,12-dienoate), and from traditional Tibetan medicine/Sowa rigpa was Chelerythrine (IUPAC name: 1,2-Dimethoxy-12-methyl-9H-[1,3]benzodioxolo[5,6-c]phenanthridin-12-ium), compared to the control (2E)-1-(4-nitrophenyl)-2-[(4-nitrophenyl)methylidene]hydrazine. No Ames toxicity was predicted for prioritized compounds while control depicted this toxicity. (4-Hydroxybenzyl)thiocarbamic acid showed hepatotoxicity, while Chelerythrine depicted hERG inhibition, which can lead to QT syndrome, so we recommend ZINC13507461 for further testing in lab. Pharmacological based pharmacokinetic modeling revealed that it has low bioavailability and hence, absorption in healthy state. In cirrhosis and renal impairment, absorption and plasma accumulation increased so we recommend further investigation into this occurrence and recommend high dosage in further tests to increase bioavailability. |
format | Online Article Text |
id | pubmed-9692583 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-96925832022-11-26 Inferring Therapeutic Targets in Candida albicans and Possible Inhibition through Natural Products: A Binding and Physiological Based Pharmacokinetics Snapshot Basharat, Zarrin Khan, Kanwal Jalal, Khurshid Alnasser, Sulaiman Mohammed Majeed, Sania Zehra, Marium Life (Basel) Article Despite being responsible for invasive infections, fungal pathogens have been underrepresented in computer aided therapeutic target mining and drug design. Excess of Candida albicans causes candidiasis, causative of thrush and vaginal infection due to off-balance. In this study, we attempted to mine drug targets (n = 46) using a subtractive proteomic approach in this pathogenic yeast and screen natural products with inhibition potential against fructose-bisphosphate aldolase (FBA) of the C. albicans. The top compound selected on the basis of best docking score from traditional Indian medicine/Ayurvedic library was (4-Hydroxybenzyl)thiocarbamic acid, from the ZINC FBA inhibitor library was ZINC13507461 (IUPAC name: [(2R)-2-hydroxy-3-phosphonooxypropyl] (9E,12E)-octadeca-9,12-dienoate), and from traditional Tibetan medicine/Sowa rigpa was Chelerythrine (IUPAC name: 1,2-Dimethoxy-12-methyl-9H-[1,3]benzodioxolo[5,6-c]phenanthridin-12-ium), compared to the control (2E)-1-(4-nitrophenyl)-2-[(4-nitrophenyl)methylidene]hydrazine. No Ames toxicity was predicted for prioritized compounds while control depicted this toxicity. (4-Hydroxybenzyl)thiocarbamic acid showed hepatotoxicity, while Chelerythrine depicted hERG inhibition, which can lead to QT syndrome, so we recommend ZINC13507461 for further testing in lab. Pharmacological based pharmacokinetic modeling revealed that it has low bioavailability and hence, absorption in healthy state. In cirrhosis and renal impairment, absorption and plasma accumulation increased so we recommend further investigation into this occurrence and recommend high dosage in further tests to increase bioavailability. MDPI 2022-10-30 /pmc/articles/PMC9692583/ /pubmed/36362898 http://dx.doi.org/10.3390/life12111743 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Basharat, Zarrin Khan, Kanwal Jalal, Khurshid Alnasser, Sulaiman Mohammed Majeed, Sania Zehra, Marium Inferring Therapeutic Targets in Candida albicans and Possible Inhibition through Natural Products: A Binding and Physiological Based Pharmacokinetics Snapshot |
title | Inferring Therapeutic Targets in Candida albicans and Possible Inhibition through Natural Products: A Binding and Physiological Based Pharmacokinetics Snapshot |
title_full | Inferring Therapeutic Targets in Candida albicans and Possible Inhibition through Natural Products: A Binding and Physiological Based Pharmacokinetics Snapshot |
title_fullStr | Inferring Therapeutic Targets in Candida albicans and Possible Inhibition through Natural Products: A Binding and Physiological Based Pharmacokinetics Snapshot |
title_full_unstemmed | Inferring Therapeutic Targets in Candida albicans and Possible Inhibition through Natural Products: A Binding and Physiological Based Pharmacokinetics Snapshot |
title_short | Inferring Therapeutic Targets in Candida albicans and Possible Inhibition through Natural Products: A Binding and Physiological Based Pharmacokinetics Snapshot |
title_sort | inferring therapeutic targets in candida albicans and possible inhibition through natural products: a binding and physiological based pharmacokinetics snapshot |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9692583/ https://www.ncbi.nlm.nih.gov/pubmed/36362898 http://dx.doi.org/10.3390/life12111743 |
work_keys_str_mv | AT basharatzarrin inferringtherapeutictargetsincandidaalbicansandpossibleinhibitionthroughnaturalproductsabindingandphysiologicalbasedpharmacokineticssnapshot AT khankanwal inferringtherapeutictargetsincandidaalbicansandpossibleinhibitionthroughnaturalproductsabindingandphysiologicalbasedpharmacokineticssnapshot AT jalalkhurshid inferringtherapeutictargetsincandidaalbicansandpossibleinhibitionthroughnaturalproductsabindingandphysiologicalbasedpharmacokineticssnapshot AT alnassersulaimanmohammed inferringtherapeutictargetsincandidaalbicansandpossibleinhibitionthroughnaturalproductsabindingandphysiologicalbasedpharmacokineticssnapshot AT majeedsania inferringtherapeutictargetsincandidaalbicansandpossibleinhibitionthroughnaturalproductsabindingandphysiologicalbasedpharmacokineticssnapshot AT zehramarium inferringtherapeutictargetsincandidaalbicansandpossibleinhibitionthroughnaturalproductsabindingandphysiologicalbasedpharmacokineticssnapshot |