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Comparative Evaluation of Luminex xTAG(®) Gastrointestinal Pathogen Panel and Direct-From-Stool Real-Time PCR for Detection of C. difficile Toxin tcdB in Stool Samples from a Pediatric Population
Detection of Clostridioides difficile toxins in patients with gastroenteritis has increasingly been accomplished through the use of enteric multiplex syndromic panels. Comparisons of the performance of these panels to both direct-from-stool (DFS) and culture-enriched stools followed by polymerase ch...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9693576/ https://www.ncbi.nlm.nih.gov/pubmed/36363805 http://dx.doi.org/10.3390/microorganisms10112214 |
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author | Tyrrell, Hannah Morin, Sarah B. N. Lloyd, Colin D. Parsons, Brendon Stokowski, Taryn Xie, Jianling Zhuo, Ran Lee, Bonita E. Pang, Xiao-Li Freedman, Stephen B. Chui, Linda |
author_facet | Tyrrell, Hannah Morin, Sarah B. N. Lloyd, Colin D. Parsons, Brendon Stokowski, Taryn Xie, Jianling Zhuo, Ran Lee, Bonita E. Pang, Xiao-Li Freedman, Stephen B. Chui, Linda |
author_sort | Tyrrell, Hannah |
collection | PubMed |
description | Detection of Clostridioides difficile toxins in patients with gastroenteritis has increasingly been accomplished through the use of enteric multiplex syndromic panels. Comparisons of the performance of these panels to both direct-from-stool (DFS) and culture-enriched stools followed by polymerase chain reaction (PCR) methods in pediatric populations are limited. Here, we compare the performance of the Luminex xTAG(®) Gastrointestinal Pathogen Panel (GPP) to our DFS in-house real-time PCR (DFS RT-PCR) assay for the detection of C. difficile toxin gene, tcdB, using 2641 stool specimens collected from children enrolled in the Alberta Provincial Pediatric EnTeric Infection Team (APPETITE) study in Alberta, Canada. We used culture enrichment followed by in-house RT-PCR to resolve discordant results between the two assays. We found excellent agreement (k = 0.89) between the GPP and our DFS RT-PCR assay: the positive percent agreement between the two assays was 97%, and the negative percent agreement was 99%. GPP, a multi-analyte platform can easily be implemented into a routine diagnostic laboratory for detecting enteric pathogens including C. difficile. |
format | Online Article Text |
id | pubmed-9693576 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-96935762022-11-26 Comparative Evaluation of Luminex xTAG(®) Gastrointestinal Pathogen Panel and Direct-From-Stool Real-Time PCR for Detection of C. difficile Toxin tcdB in Stool Samples from a Pediatric Population Tyrrell, Hannah Morin, Sarah B. N. Lloyd, Colin D. Parsons, Brendon Stokowski, Taryn Xie, Jianling Zhuo, Ran Lee, Bonita E. Pang, Xiao-Li Freedman, Stephen B. Chui, Linda Microorganisms Article Detection of Clostridioides difficile toxins in patients with gastroenteritis has increasingly been accomplished through the use of enteric multiplex syndromic panels. Comparisons of the performance of these panels to both direct-from-stool (DFS) and culture-enriched stools followed by polymerase chain reaction (PCR) methods in pediatric populations are limited. Here, we compare the performance of the Luminex xTAG(®) Gastrointestinal Pathogen Panel (GPP) to our DFS in-house real-time PCR (DFS RT-PCR) assay for the detection of C. difficile toxin gene, tcdB, using 2641 stool specimens collected from children enrolled in the Alberta Provincial Pediatric EnTeric Infection Team (APPETITE) study in Alberta, Canada. We used culture enrichment followed by in-house RT-PCR to resolve discordant results between the two assays. We found excellent agreement (k = 0.89) between the GPP and our DFS RT-PCR assay: the positive percent agreement between the two assays was 97%, and the negative percent agreement was 99%. GPP, a multi-analyte platform can easily be implemented into a routine diagnostic laboratory for detecting enteric pathogens including C. difficile. MDPI 2022-11-09 /pmc/articles/PMC9693576/ /pubmed/36363805 http://dx.doi.org/10.3390/microorganisms10112214 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Tyrrell, Hannah Morin, Sarah B. N. Lloyd, Colin D. Parsons, Brendon Stokowski, Taryn Xie, Jianling Zhuo, Ran Lee, Bonita E. Pang, Xiao-Li Freedman, Stephen B. Chui, Linda Comparative Evaluation of Luminex xTAG(®) Gastrointestinal Pathogen Panel and Direct-From-Stool Real-Time PCR for Detection of C. difficile Toxin tcdB in Stool Samples from a Pediatric Population |
title | Comparative Evaluation of Luminex xTAG(®) Gastrointestinal Pathogen Panel and Direct-From-Stool Real-Time PCR for Detection of C. difficile Toxin tcdB in Stool Samples from a Pediatric Population |
title_full | Comparative Evaluation of Luminex xTAG(®) Gastrointestinal Pathogen Panel and Direct-From-Stool Real-Time PCR for Detection of C. difficile Toxin tcdB in Stool Samples from a Pediatric Population |
title_fullStr | Comparative Evaluation of Luminex xTAG(®) Gastrointestinal Pathogen Panel and Direct-From-Stool Real-Time PCR for Detection of C. difficile Toxin tcdB in Stool Samples from a Pediatric Population |
title_full_unstemmed | Comparative Evaluation of Luminex xTAG(®) Gastrointestinal Pathogen Panel and Direct-From-Stool Real-Time PCR for Detection of C. difficile Toxin tcdB in Stool Samples from a Pediatric Population |
title_short | Comparative Evaluation of Luminex xTAG(®) Gastrointestinal Pathogen Panel and Direct-From-Stool Real-Time PCR for Detection of C. difficile Toxin tcdB in Stool Samples from a Pediatric Population |
title_sort | comparative evaluation of luminex xtag(®) gastrointestinal pathogen panel and direct-from-stool real-time pcr for detection of c. difficile toxin tcdb in stool samples from a pediatric population |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9693576/ https://www.ncbi.nlm.nih.gov/pubmed/36363805 http://dx.doi.org/10.3390/microorganisms10112214 |
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