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An open source plant kinase chemogenomics set

One hundred twenty‐nine protein kinases, selected to represent the diversity of the rice ( Oryza sativa ) kinome, were cloned and tested for expression in Escherichia coli . Forty of these rice kinases were purified and screened using differential scanning fluorimetry (DSF) against 627 diverse kinas...

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Autores principales: Ercoli, Maria Florencia, Ramos, Priscila Zonzini, Jain, Rashmi, Pilotte, Joseph, Dong, Oliver Xiaoou, Thompson, Ty, Wells, Carrow I., Elkins, Jonathan M., Edwards, Aled M., Couñago, Rafael M., Drewry, David H., Ronald, Pamela C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9694430/
https://www.ncbi.nlm.nih.gov/pubmed/36447653
http://dx.doi.org/10.1002/pld3.460
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author Ercoli, Maria Florencia
Ramos, Priscila Zonzini
Jain, Rashmi
Pilotte, Joseph
Dong, Oliver Xiaoou
Thompson, Ty
Wells, Carrow I.
Elkins, Jonathan M.
Edwards, Aled M.
Couñago, Rafael M.
Drewry, David H.
Ronald, Pamela C.
author_facet Ercoli, Maria Florencia
Ramos, Priscila Zonzini
Jain, Rashmi
Pilotte, Joseph
Dong, Oliver Xiaoou
Thompson, Ty
Wells, Carrow I.
Elkins, Jonathan M.
Edwards, Aled M.
Couñago, Rafael M.
Drewry, David H.
Ronald, Pamela C.
author_sort Ercoli, Maria Florencia
collection PubMed
description One hundred twenty‐nine protein kinases, selected to represent the diversity of the rice ( Oryza sativa ) kinome, were cloned and tested for expression in Escherichia coli . Forty of these rice kinases were purified and screened using differential scanning fluorimetry (DSF) against 627 diverse kinase inhibitors, with a range of structures and activities targeting diverse human kinases. Thirty‐seven active compounds were then tested for their ability to modify primary root development in Arabidopsis. Of these, 14 compounds caused a significant reduction of primary root length compared with control plants. Two of these inhibitory compounds bind to the predicted orthologue of Arabidopsis PSKR1, one of two receptors for PSK, a small sulfated peptide that positively controls root development. The reduced root length phenotype could not be rescued by the exogenous addition of the PSK peptide, suggesting that chemical treatment may inhibit both PSKR1 and its closely related receptor PSKR2. Six of the compounds acting as root growth inhibitors in Arabidopsis conferred the same effect in rice. Compound RAF265 (CHIR‐265), previously shown to bind the human kinase BRAF (B‐Raf proto‐oncogene, serine/threonine kinase), also binds to nine highly conserved rice kinases tested. The binding of human and rice kinases to the same compound suggests that human kinase inhibitor sets will be useful for dissecting the function of plant kinases.
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spelling pubmed-96944302022-11-28 An open source plant kinase chemogenomics set Ercoli, Maria Florencia Ramos, Priscila Zonzini Jain, Rashmi Pilotte, Joseph Dong, Oliver Xiaoou Thompson, Ty Wells, Carrow I. Elkins, Jonathan M. Edwards, Aled M. Couñago, Rafael M. Drewry, David H. Ronald, Pamela C. Plant Direct Original Research One hundred twenty‐nine protein kinases, selected to represent the diversity of the rice ( Oryza sativa ) kinome, were cloned and tested for expression in Escherichia coli . Forty of these rice kinases were purified and screened using differential scanning fluorimetry (DSF) against 627 diverse kinase inhibitors, with a range of structures and activities targeting diverse human kinases. Thirty‐seven active compounds were then tested for their ability to modify primary root development in Arabidopsis. Of these, 14 compounds caused a significant reduction of primary root length compared with control plants. Two of these inhibitory compounds bind to the predicted orthologue of Arabidopsis PSKR1, one of two receptors for PSK, a small sulfated peptide that positively controls root development. The reduced root length phenotype could not be rescued by the exogenous addition of the PSK peptide, suggesting that chemical treatment may inhibit both PSKR1 and its closely related receptor PSKR2. Six of the compounds acting as root growth inhibitors in Arabidopsis conferred the same effect in rice. Compound RAF265 (CHIR‐265), previously shown to bind the human kinase BRAF (B‐Raf proto‐oncogene, serine/threonine kinase), also binds to nine highly conserved rice kinases tested. The binding of human and rice kinases to the same compound suggests that human kinase inhibitor sets will be useful for dissecting the function of plant kinases. John Wiley and Sons Inc. 2022-11-25 /pmc/articles/PMC9694430/ /pubmed/36447653 http://dx.doi.org/10.1002/pld3.460 Text en © 2022 The Authors. Plant Direct published by American Society of Plant Biologists and the Society for Experimental Biology and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Ercoli, Maria Florencia
Ramos, Priscila Zonzini
Jain, Rashmi
Pilotte, Joseph
Dong, Oliver Xiaoou
Thompson, Ty
Wells, Carrow I.
Elkins, Jonathan M.
Edwards, Aled M.
Couñago, Rafael M.
Drewry, David H.
Ronald, Pamela C.
An open source plant kinase chemogenomics set
title An open source plant kinase chemogenomics set
title_full An open source plant kinase chemogenomics set
title_fullStr An open source plant kinase chemogenomics set
title_full_unstemmed An open source plant kinase chemogenomics set
title_short An open source plant kinase chemogenomics set
title_sort open source plant kinase chemogenomics set
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9694430/
https://www.ncbi.nlm.nih.gov/pubmed/36447653
http://dx.doi.org/10.1002/pld3.460
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