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An open source plant kinase chemogenomics set
One hundred twenty‐nine protein kinases, selected to represent the diversity of the rice ( Oryza sativa ) kinome, were cloned and tested for expression in Escherichia coli . Forty of these rice kinases were purified and screened using differential scanning fluorimetry (DSF) against 627 diverse kinas...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9694430/ https://www.ncbi.nlm.nih.gov/pubmed/36447653 http://dx.doi.org/10.1002/pld3.460 |
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author | Ercoli, Maria Florencia Ramos, Priscila Zonzini Jain, Rashmi Pilotte, Joseph Dong, Oliver Xiaoou Thompson, Ty Wells, Carrow I. Elkins, Jonathan M. Edwards, Aled M. Couñago, Rafael M. Drewry, David H. Ronald, Pamela C. |
author_facet | Ercoli, Maria Florencia Ramos, Priscila Zonzini Jain, Rashmi Pilotte, Joseph Dong, Oliver Xiaoou Thompson, Ty Wells, Carrow I. Elkins, Jonathan M. Edwards, Aled M. Couñago, Rafael M. Drewry, David H. Ronald, Pamela C. |
author_sort | Ercoli, Maria Florencia |
collection | PubMed |
description | One hundred twenty‐nine protein kinases, selected to represent the diversity of the rice ( Oryza sativa ) kinome, were cloned and tested for expression in Escherichia coli . Forty of these rice kinases were purified and screened using differential scanning fluorimetry (DSF) against 627 diverse kinase inhibitors, with a range of structures and activities targeting diverse human kinases. Thirty‐seven active compounds were then tested for their ability to modify primary root development in Arabidopsis. Of these, 14 compounds caused a significant reduction of primary root length compared with control plants. Two of these inhibitory compounds bind to the predicted orthologue of Arabidopsis PSKR1, one of two receptors for PSK, a small sulfated peptide that positively controls root development. The reduced root length phenotype could not be rescued by the exogenous addition of the PSK peptide, suggesting that chemical treatment may inhibit both PSKR1 and its closely related receptor PSKR2. Six of the compounds acting as root growth inhibitors in Arabidopsis conferred the same effect in rice. Compound RAF265 (CHIR‐265), previously shown to bind the human kinase BRAF (B‐Raf proto‐oncogene, serine/threonine kinase), also binds to nine highly conserved rice kinases tested. The binding of human and rice kinases to the same compound suggests that human kinase inhibitor sets will be useful for dissecting the function of plant kinases. |
format | Online Article Text |
id | pubmed-9694430 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-96944302022-11-28 An open source plant kinase chemogenomics set Ercoli, Maria Florencia Ramos, Priscila Zonzini Jain, Rashmi Pilotte, Joseph Dong, Oliver Xiaoou Thompson, Ty Wells, Carrow I. Elkins, Jonathan M. Edwards, Aled M. Couñago, Rafael M. Drewry, David H. Ronald, Pamela C. Plant Direct Original Research One hundred twenty‐nine protein kinases, selected to represent the diversity of the rice ( Oryza sativa ) kinome, were cloned and tested for expression in Escherichia coli . Forty of these rice kinases were purified and screened using differential scanning fluorimetry (DSF) against 627 diverse kinase inhibitors, with a range of structures and activities targeting diverse human kinases. Thirty‐seven active compounds were then tested for their ability to modify primary root development in Arabidopsis. Of these, 14 compounds caused a significant reduction of primary root length compared with control plants. Two of these inhibitory compounds bind to the predicted orthologue of Arabidopsis PSKR1, one of two receptors for PSK, a small sulfated peptide that positively controls root development. The reduced root length phenotype could not be rescued by the exogenous addition of the PSK peptide, suggesting that chemical treatment may inhibit both PSKR1 and its closely related receptor PSKR2. Six of the compounds acting as root growth inhibitors in Arabidopsis conferred the same effect in rice. Compound RAF265 (CHIR‐265), previously shown to bind the human kinase BRAF (B‐Raf proto‐oncogene, serine/threonine kinase), also binds to nine highly conserved rice kinases tested. The binding of human and rice kinases to the same compound suggests that human kinase inhibitor sets will be useful for dissecting the function of plant kinases. John Wiley and Sons Inc. 2022-11-25 /pmc/articles/PMC9694430/ /pubmed/36447653 http://dx.doi.org/10.1002/pld3.460 Text en © 2022 The Authors. Plant Direct published by American Society of Plant Biologists and the Society for Experimental Biology and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Research Ercoli, Maria Florencia Ramos, Priscila Zonzini Jain, Rashmi Pilotte, Joseph Dong, Oliver Xiaoou Thompson, Ty Wells, Carrow I. Elkins, Jonathan M. Edwards, Aled M. Couñago, Rafael M. Drewry, David H. Ronald, Pamela C. An open source plant kinase chemogenomics set |
title | An open source plant kinase chemogenomics set |
title_full | An open source plant kinase chemogenomics set |
title_fullStr | An open source plant kinase chemogenomics set |
title_full_unstemmed | An open source plant kinase chemogenomics set |
title_short | An open source plant kinase chemogenomics set |
title_sort | open source plant kinase chemogenomics set |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9694430/ https://www.ncbi.nlm.nih.gov/pubmed/36447653 http://dx.doi.org/10.1002/pld3.460 |
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