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A New Zn(II) Metal Hybrid Material of 5-Nitrobenzimidazolium Organic Cation (C(7)H(6)N(3)O(2))(2)[ZnCl(4)]: Elaboration, Structure, Hirshfeld Surface, Spectroscopic, Molecular Docking Analysis, Electric and Dielectric Properties
The slow solvent evaporation approach was used to create a single crystal of (C(7)H(6)N(3)O(2))(2)[ZnCl(4)] at room temperature. Our compound has been investigated by single-crystal XRD which declares that the complex crystallizes in the monoclinic crystallographic system with the P2(1)/c as a space...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9697581/ https://www.ncbi.nlm.nih.gov/pubmed/36431459 http://dx.doi.org/10.3390/ma15227973 |
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author | Ayari, Chaima Alotaibi, Abdullah A. Baashen, Mohammed A. Perveen, Fouzia Almarri, Abdulhadi H. Alotaibi, Khalid M. Abdelbaky, Mohammed S. M. Garcia-Granda, Santiago Othmani, Abdelhak Nasr, Cherif Ben Mrad, Mohamed Habib |
author_facet | Ayari, Chaima Alotaibi, Abdullah A. Baashen, Mohammed A. Perveen, Fouzia Almarri, Abdulhadi H. Alotaibi, Khalid M. Abdelbaky, Mohammed S. M. Garcia-Granda, Santiago Othmani, Abdelhak Nasr, Cherif Ben Mrad, Mohamed Habib |
author_sort | Ayari, Chaima |
collection | PubMed |
description | The slow solvent evaporation approach was used to create a single crystal of (C(7)H(6)N(3)O(2))(2)[ZnCl(4)] at room temperature. Our compound has been investigated by single-crystal XRD which declares that the complex crystallizes in the monoclinic crystallographic system with the P2(1)/c as a space group. The molecular arrangement of the compound can be described by slightly distorted tetrahedral ZnCl(4)(2−) anionic entities and 5-nitrobenzimidazolium as cations, linked together by different non-covalent interaction types (H-bonds, Cl…Cl, π…π and C–H…π). Hirshfeld’s surface study allows us to identify that the dominant contacts in the crystal building are H…Cl/Cl…H contacts (37.3%). FT-IR method was used to identify the different groups in (C(7)H(6)N(3)O(2))(2)[ZnCl(4)]. Furthermore, impedance spectroscopy analysis in 393 ≤ T ≤ 438 K shows that the temperature dependence of DC conductivity follows Arrhenius’ law. The frequency–temperature dependence of AC conductivity for the studied sample shows one region (E(a) = 2.75 eV). In order to determine modes of interactions of compound with double stranded DNA, molecular docking simulations were performed at molecular level. |
format | Online Article Text |
id | pubmed-9697581 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-96975812022-11-26 A New Zn(II) Metal Hybrid Material of 5-Nitrobenzimidazolium Organic Cation (C(7)H(6)N(3)O(2))(2)[ZnCl(4)]: Elaboration, Structure, Hirshfeld Surface, Spectroscopic, Molecular Docking Analysis, Electric and Dielectric Properties Ayari, Chaima Alotaibi, Abdullah A. Baashen, Mohammed A. Perveen, Fouzia Almarri, Abdulhadi H. Alotaibi, Khalid M. Abdelbaky, Mohammed S. M. Garcia-Granda, Santiago Othmani, Abdelhak Nasr, Cherif Ben Mrad, Mohamed Habib Materials (Basel) Article The slow solvent evaporation approach was used to create a single crystal of (C(7)H(6)N(3)O(2))(2)[ZnCl(4)] at room temperature. Our compound has been investigated by single-crystal XRD which declares that the complex crystallizes in the monoclinic crystallographic system with the P2(1)/c as a space group. The molecular arrangement of the compound can be described by slightly distorted tetrahedral ZnCl(4)(2−) anionic entities and 5-nitrobenzimidazolium as cations, linked together by different non-covalent interaction types (H-bonds, Cl…Cl, π…π and C–H…π). Hirshfeld’s surface study allows us to identify that the dominant contacts in the crystal building are H…Cl/Cl…H contacts (37.3%). FT-IR method was used to identify the different groups in (C(7)H(6)N(3)O(2))(2)[ZnCl(4)]. Furthermore, impedance spectroscopy analysis in 393 ≤ T ≤ 438 K shows that the temperature dependence of DC conductivity follows Arrhenius’ law. The frequency–temperature dependence of AC conductivity for the studied sample shows one region (E(a) = 2.75 eV). In order to determine modes of interactions of compound with double stranded DNA, molecular docking simulations were performed at molecular level. MDPI 2022-11-11 /pmc/articles/PMC9697581/ /pubmed/36431459 http://dx.doi.org/10.3390/ma15227973 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Ayari, Chaima Alotaibi, Abdullah A. Baashen, Mohammed A. Perveen, Fouzia Almarri, Abdulhadi H. Alotaibi, Khalid M. Abdelbaky, Mohammed S. M. Garcia-Granda, Santiago Othmani, Abdelhak Nasr, Cherif Ben Mrad, Mohamed Habib A New Zn(II) Metal Hybrid Material of 5-Nitrobenzimidazolium Organic Cation (C(7)H(6)N(3)O(2))(2)[ZnCl(4)]: Elaboration, Structure, Hirshfeld Surface, Spectroscopic, Molecular Docking Analysis, Electric and Dielectric Properties |
title | A New Zn(II) Metal Hybrid Material of 5-Nitrobenzimidazolium Organic Cation (C(7)H(6)N(3)O(2))(2)[ZnCl(4)]: Elaboration, Structure, Hirshfeld Surface, Spectroscopic, Molecular Docking Analysis, Electric and Dielectric Properties |
title_full | A New Zn(II) Metal Hybrid Material of 5-Nitrobenzimidazolium Organic Cation (C(7)H(6)N(3)O(2))(2)[ZnCl(4)]: Elaboration, Structure, Hirshfeld Surface, Spectroscopic, Molecular Docking Analysis, Electric and Dielectric Properties |
title_fullStr | A New Zn(II) Metal Hybrid Material of 5-Nitrobenzimidazolium Organic Cation (C(7)H(6)N(3)O(2))(2)[ZnCl(4)]: Elaboration, Structure, Hirshfeld Surface, Spectroscopic, Molecular Docking Analysis, Electric and Dielectric Properties |
title_full_unstemmed | A New Zn(II) Metal Hybrid Material of 5-Nitrobenzimidazolium Organic Cation (C(7)H(6)N(3)O(2))(2)[ZnCl(4)]: Elaboration, Structure, Hirshfeld Surface, Spectroscopic, Molecular Docking Analysis, Electric and Dielectric Properties |
title_short | A New Zn(II) Metal Hybrid Material of 5-Nitrobenzimidazolium Organic Cation (C(7)H(6)N(3)O(2))(2)[ZnCl(4)]: Elaboration, Structure, Hirshfeld Surface, Spectroscopic, Molecular Docking Analysis, Electric and Dielectric Properties |
title_sort | new zn(ii) metal hybrid material of 5-nitrobenzimidazolium organic cation (c(7)h(6)n(3)o(2))(2)[zncl(4)]: elaboration, structure, hirshfeld surface, spectroscopic, molecular docking analysis, electric and dielectric properties |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9697581/ https://www.ncbi.nlm.nih.gov/pubmed/36431459 http://dx.doi.org/10.3390/ma15227973 |
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