Cargando…
Identification of CAMTA Gene Family in Heimia myrtifolia and Expression Analysis under Drought Stress
Calmodulin-binding transcription factor (CAMTA) is an important component of plant hormone signal transduction, development, and drought resistance. Based on previous transcriptome data, drought resistance genes of the Heimia myrtifolia CAMTA transcription factor family were predicted in this study....
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9698416/ https://www.ncbi.nlm.nih.gov/pubmed/36432758 http://dx.doi.org/10.3390/plants11223031 |
_version_ | 1784838811382972416 |
---|---|
author | Yang, Liyuan Zhao, Yu Zhang, Guozhe Shang, Linxue Wang, Qun Hong, Sidan Ma, Qingqing Gu, Cuihua |
author_facet | Yang, Liyuan Zhao, Yu Zhang, Guozhe Shang, Linxue Wang, Qun Hong, Sidan Ma, Qingqing Gu, Cuihua |
author_sort | Yang, Liyuan |
collection | PubMed |
description | Calmodulin-binding transcription factor (CAMTA) is an important component of plant hormone signal transduction, development, and drought resistance. Based on previous transcriptome data, drought resistance genes of the Heimia myrtifolia CAMTA transcription factor family were predicted in this study. The physicochemical characteristics of amino acids, subcellular localization, transmembrane structure, GO enrichment, and expression patterns were also examined. The results revealed that H. myrtifolia has a total of ten members (HmCAMTA1~10). Phylogenetic tree analysis of the HmCAMTA gene family revealed four different branches. The amino acid composition of CAMTA from H. myrtifolia and Punica granatum was quite similar. In addition, qRT-PCR data showed that the expression levels of HmCAMTA1, HmCAMTA2, and HmCAMTA10 genes increased with the deepening of drought, and the peak values appeared in the T4 treatment. Therefore, it is speculated that the above four genes are involved in the response of H. myrtifolia to drought stress. Additionally, HmCAMTA gene expression was shown to be more abundant in roots and leaves than in other tissues according to tissue-specific expression patterns. This study can be used to learn more about the function of CAMTA family genes and the drought tolerance response mechanism in H. myrtifolia. |
format | Online Article Text |
id | pubmed-9698416 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-96984162022-11-26 Identification of CAMTA Gene Family in Heimia myrtifolia and Expression Analysis under Drought Stress Yang, Liyuan Zhao, Yu Zhang, Guozhe Shang, Linxue Wang, Qun Hong, Sidan Ma, Qingqing Gu, Cuihua Plants (Basel) Article Calmodulin-binding transcription factor (CAMTA) is an important component of plant hormone signal transduction, development, and drought resistance. Based on previous transcriptome data, drought resistance genes of the Heimia myrtifolia CAMTA transcription factor family were predicted in this study. The physicochemical characteristics of amino acids, subcellular localization, transmembrane structure, GO enrichment, and expression patterns were also examined. The results revealed that H. myrtifolia has a total of ten members (HmCAMTA1~10). Phylogenetic tree analysis of the HmCAMTA gene family revealed four different branches. The amino acid composition of CAMTA from H. myrtifolia and Punica granatum was quite similar. In addition, qRT-PCR data showed that the expression levels of HmCAMTA1, HmCAMTA2, and HmCAMTA10 genes increased with the deepening of drought, and the peak values appeared in the T4 treatment. Therefore, it is speculated that the above four genes are involved in the response of H. myrtifolia to drought stress. Additionally, HmCAMTA gene expression was shown to be more abundant in roots and leaves than in other tissues according to tissue-specific expression patterns. This study can be used to learn more about the function of CAMTA family genes and the drought tolerance response mechanism in H. myrtifolia. MDPI 2022-11-09 /pmc/articles/PMC9698416/ /pubmed/36432758 http://dx.doi.org/10.3390/plants11223031 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Yang, Liyuan Zhao, Yu Zhang, Guozhe Shang, Linxue Wang, Qun Hong, Sidan Ma, Qingqing Gu, Cuihua Identification of CAMTA Gene Family in Heimia myrtifolia and Expression Analysis under Drought Stress |
title | Identification of CAMTA Gene Family in Heimia myrtifolia and Expression Analysis under Drought Stress |
title_full | Identification of CAMTA Gene Family in Heimia myrtifolia and Expression Analysis under Drought Stress |
title_fullStr | Identification of CAMTA Gene Family in Heimia myrtifolia and Expression Analysis under Drought Stress |
title_full_unstemmed | Identification of CAMTA Gene Family in Heimia myrtifolia and Expression Analysis under Drought Stress |
title_short | Identification of CAMTA Gene Family in Heimia myrtifolia and Expression Analysis under Drought Stress |
title_sort | identification of camta gene family in heimia myrtifolia and expression analysis under drought stress |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9698416/ https://www.ncbi.nlm.nih.gov/pubmed/36432758 http://dx.doi.org/10.3390/plants11223031 |
work_keys_str_mv | AT yangliyuan identificationofcamtagenefamilyinheimiamyrtifoliaandexpressionanalysisunderdroughtstress AT zhaoyu identificationofcamtagenefamilyinheimiamyrtifoliaandexpressionanalysisunderdroughtstress AT zhangguozhe identificationofcamtagenefamilyinheimiamyrtifoliaandexpressionanalysisunderdroughtstress AT shanglinxue identificationofcamtagenefamilyinheimiamyrtifoliaandexpressionanalysisunderdroughtstress AT wangqun identificationofcamtagenefamilyinheimiamyrtifoliaandexpressionanalysisunderdroughtstress AT hongsidan identificationofcamtagenefamilyinheimiamyrtifoliaandexpressionanalysisunderdroughtstress AT maqingqing identificationofcamtagenefamilyinheimiamyrtifoliaandexpressionanalysisunderdroughtstress AT gucuihua identificationofcamtagenefamilyinheimiamyrtifoliaandexpressionanalysisunderdroughtstress |