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A New Approach for Controlling Agrobacterium tumefaciens Post Transformation Using Lytic Bacteriophage

Overgrowth of Agrobacterium tumefaciens has frequently been found in Agrobacterium-mediated plant transformation. This overgrowth can reduce transformation efficiency and even lead to explant death. Therefore, this research investigates an alternative way to mitigate or eliminate Agrobacterium after...

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Autores principales: Ramadhan, Fiqih, Alfiko, Yuzer, Purwantomo, Sigit, Mubarok, Andhika Faisal, Budinarta, Widyah, Suwanto, Antonius, Budiarti, Sri
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9698577/
https://www.ncbi.nlm.nih.gov/pubmed/36432853
http://dx.doi.org/10.3390/plants11223124
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author Ramadhan, Fiqih
Alfiko, Yuzer
Purwantomo, Sigit
Mubarok, Andhika Faisal
Budinarta, Widyah
Suwanto, Antonius
Budiarti, Sri
author_facet Ramadhan, Fiqih
Alfiko, Yuzer
Purwantomo, Sigit
Mubarok, Andhika Faisal
Budinarta, Widyah
Suwanto, Antonius
Budiarti, Sri
author_sort Ramadhan, Fiqih
collection PubMed
description Overgrowth of Agrobacterium tumefaciens has frequently been found in Agrobacterium-mediated plant transformation. This overgrowth can reduce transformation efficiency and even lead to explant death. Therefore, this research investigates an alternative way to mitigate or eliminate Agrobacterium after transformation using a bacteriophage. To develop this alternative method, we conducted effectiveness studies of two lytic bacteriophages (ΦK2 and ΦK4) and performed an application test to control Agrobacterium growth after transformation. According to plaque morphological characterization and molecular analysis, the two bacteriophages used in this experiment were distinct. Moreover, some stability physicochemical and growth kinetics, such as adsorption time and susceptibility test, also showed that both bacteriophages differed. On the other hand, the optimum temperature and pH of both phages were the same at 28–30 °C and pH 7. Further investigation showed that both ΦK2 and ΦK4 were able to reduce the overgrowth of A. tumefaciens post transformation. Moreover, applying the cocktail (mixture of ΦK2 and ΦK4) with antibiotic application eradicated A. tumefaciens (0% overgrowth percentage). This result indicates that the application of bacteriophage could be used as an alternative way to eradicate the overgrowth of A. tumefaciens subsequent to transformation.
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spelling pubmed-96985772022-11-26 A New Approach for Controlling Agrobacterium tumefaciens Post Transformation Using Lytic Bacteriophage Ramadhan, Fiqih Alfiko, Yuzer Purwantomo, Sigit Mubarok, Andhika Faisal Budinarta, Widyah Suwanto, Antonius Budiarti, Sri Plants (Basel) Article Overgrowth of Agrobacterium tumefaciens has frequently been found in Agrobacterium-mediated plant transformation. This overgrowth can reduce transformation efficiency and even lead to explant death. Therefore, this research investigates an alternative way to mitigate or eliminate Agrobacterium after transformation using a bacteriophage. To develop this alternative method, we conducted effectiveness studies of two lytic bacteriophages (ΦK2 and ΦK4) and performed an application test to control Agrobacterium growth after transformation. According to plaque morphological characterization and molecular analysis, the two bacteriophages used in this experiment were distinct. Moreover, some stability physicochemical and growth kinetics, such as adsorption time and susceptibility test, also showed that both bacteriophages differed. On the other hand, the optimum temperature and pH of both phages were the same at 28–30 °C and pH 7. Further investigation showed that both ΦK2 and ΦK4 were able to reduce the overgrowth of A. tumefaciens post transformation. Moreover, applying the cocktail (mixture of ΦK2 and ΦK4) with antibiotic application eradicated A. tumefaciens (0% overgrowth percentage). This result indicates that the application of bacteriophage could be used as an alternative way to eradicate the overgrowth of A. tumefaciens subsequent to transformation. MDPI 2022-11-16 /pmc/articles/PMC9698577/ /pubmed/36432853 http://dx.doi.org/10.3390/plants11223124 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ramadhan, Fiqih
Alfiko, Yuzer
Purwantomo, Sigit
Mubarok, Andhika Faisal
Budinarta, Widyah
Suwanto, Antonius
Budiarti, Sri
A New Approach for Controlling Agrobacterium tumefaciens Post Transformation Using Lytic Bacteriophage
title A New Approach for Controlling Agrobacterium tumefaciens Post Transformation Using Lytic Bacteriophage
title_full A New Approach for Controlling Agrobacterium tumefaciens Post Transformation Using Lytic Bacteriophage
title_fullStr A New Approach for Controlling Agrobacterium tumefaciens Post Transformation Using Lytic Bacteriophage
title_full_unstemmed A New Approach for Controlling Agrobacterium tumefaciens Post Transformation Using Lytic Bacteriophage
title_short A New Approach for Controlling Agrobacterium tumefaciens Post Transformation Using Lytic Bacteriophage
title_sort new approach for controlling agrobacterium tumefaciens post transformation using lytic bacteriophage
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9698577/
https://www.ncbi.nlm.nih.gov/pubmed/36432853
http://dx.doi.org/10.3390/plants11223124
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