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A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9
GP4, a new Ralstonia solanacearum phage, is a short-tailed phage. Few structures of Ralstonia solanacearum phages have been resolved to near-atomic resolution until now. Here, we present a 3.7 Å resolution structure of the GP4 head by cryo-electron microscopy (cryo-EM). The GP4 head contains 540 cop...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9698820/ https://www.ncbi.nlm.nih.gov/pubmed/36366529 http://dx.doi.org/10.3390/v14112431 |
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author | Zheng, Jing Chen, Wenyuan Xiao, Hao Yang, Fan Li, Xiaowu Song, Jingdong Cheng, Lingpeng Liu, Hongrong |
author_facet | Zheng, Jing Chen, Wenyuan Xiao, Hao Yang, Fan Li, Xiaowu Song, Jingdong Cheng, Lingpeng Liu, Hongrong |
author_sort | Zheng, Jing |
collection | PubMed |
description | GP4, a new Ralstonia solanacearum phage, is a short-tailed phage. Few structures of Ralstonia solanacearum phages have been resolved to near-atomic resolution until now. Here, we present a 3.7 Å resolution structure of the GP4 head by cryo-electron microscopy (cryo-EM). The GP4 head contains 540 copies of major capsid protein (MCP) gp2 and 540 copies of cement protein (CP) gp1 arranged in an icosahedral shell with a triangulation number T = 9. The structures of gp2 and gp1 show a canonical HK97-like fold and an Ig-like fold, respectively. The trimeric CPs stick on the surface of the head along the quasi-threefold axis of the icosahedron generating a sandwiched three-layer electrostatic complementary potential, thereby enhancing the head stability. The assembly pattern of the GP4 head provides a platform for the further exploration of the interaction between Ralstonia solanacearum and corresponding phages. |
format | Online Article Text |
id | pubmed-9698820 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-96988202022-11-26 A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9 Zheng, Jing Chen, Wenyuan Xiao, Hao Yang, Fan Li, Xiaowu Song, Jingdong Cheng, Lingpeng Liu, Hongrong Viruses Article GP4, a new Ralstonia solanacearum phage, is a short-tailed phage. Few structures of Ralstonia solanacearum phages have been resolved to near-atomic resolution until now. Here, we present a 3.7 Å resolution structure of the GP4 head by cryo-electron microscopy (cryo-EM). The GP4 head contains 540 copies of major capsid protein (MCP) gp2 and 540 copies of cement protein (CP) gp1 arranged in an icosahedral shell with a triangulation number T = 9. The structures of gp2 and gp1 show a canonical HK97-like fold and an Ig-like fold, respectively. The trimeric CPs stick on the surface of the head along the quasi-threefold axis of the icosahedron generating a sandwiched three-layer electrostatic complementary potential, thereby enhancing the head stability. The assembly pattern of the GP4 head provides a platform for the further exploration of the interaction between Ralstonia solanacearum and corresponding phages. MDPI 2022-11-01 /pmc/articles/PMC9698820/ /pubmed/36366529 http://dx.doi.org/10.3390/v14112431 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zheng, Jing Chen, Wenyuan Xiao, Hao Yang, Fan Li, Xiaowu Song, Jingdong Cheng, Lingpeng Liu, Hongrong A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9 |
title | A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9 |
title_full | A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9 |
title_fullStr | A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9 |
title_full_unstemmed | A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9 |
title_short | A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9 |
title_sort | capsid structure of ralstonia solanacearum podoviridae gp4 with a triangulation number t = 9 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9698820/ https://www.ncbi.nlm.nih.gov/pubmed/36366529 http://dx.doi.org/10.3390/v14112431 |
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