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A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9

GP4, a new Ralstonia solanacearum phage, is a short-tailed phage. Few structures of Ralstonia solanacearum phages have been resolved to near-atomic resolution until now. Here, we present a 3.7 Å resolution structure of the GP4 head by cryo-electron microscopy (cryo-EM). The GP4 head contains 540 cop...

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Autores principales: Zheng, Jing, Chen, Wenyuan, Xiao, Hao, Yang, Fan, Li, Xiaowu, Song, Jingdong, Cheng, Lingpeng, Liu, Hongrong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9698820/
https://www.ncbi.nlm.nih.gov/pubmed/36366529
http://dx.doi.org/10.3390/v14112431
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author Zheng, Jing
Chen, Wenyuan
Xiao, Hao
Yang, Fan
Li, Xiaowu
Song, Jingdong
Cheng, Lingpeng
Liu, Hongrong
author_facet Zheng, Jing
Chen, Wenyuan
Xiao, Hao
Yang, Fan
Li, Xiaowu
Song, Jingdong
Cheng, Lingpeng
Liu, Hongrong
author_sort Zheng, Jing
collection PubMed
description GP4, a new Ralstonia solanacearum phage, is a short-tailed phage. Few structures of Ralstonia solanacearum phages have been resolved to near-atomic resolution until now. Here, we present a 3.7 Å resolution structure of the GP4 head by cryo-electron microscopy (cryo-EM). The GP4 head contains 540 copies of major capsid protein (MCP) gp2 and 540 copies of cement protein (CP) gp1 arranged in an icosahedral shell with a triangulation number T = 9. The structures of gp2 and gp1 show a canonical HK97-like fold and an Ig-like fold, respectively. The trimeric CPs stick on the surface of the head along the quasi-threefold axis of the icosahedron generating a sandwiched three-layer electrostatic complementary potential, thereby enhancing the head stability. The assembly pattern of the GP4 head provides a platform for the further exploration of the interaction between Ralstonia solanacearum and corresponding phages.
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spelling pubmed-96988202022-11-26 A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9 Zheng, Jing Chen, Wenyuan Xiao, Hao Yang, Fan Li, Xiaowu Song, Jingdong Cheng, Lingpeng Liu, Hongrong Viruses Article GP4, a new Ralstonia solanacearum phage, is a short-tailed phage. Few structures of Ralstonia solanacearum phages have been resolved to near-atomic resolution until now. Here, we present a 3.7 Å resolution structure of the GP4 head by cryo-electron microscopy (cryo-EM). The GP4 head contains 540 copies of major capsid protein (MCP) gp2 and 540 copies of cement protein (CP) gp1 arranged in an icosahedral shell with a triangulation number T = 9. The structures of gp2 and gp1 show a canonical HK97-like fold and an Ig-like fold, respectively. The trimeric CPs stick on the surface of the head along the quasi-threefold axis of the icosahedron generating a sandwiched three-layer electrostatic complementary potential, thereby enhancing the head stability. The assembly pattern of the GP4 head provides a platform for the further exploration of the interaction between Ralstonia solanacearum and corresponding phages. MDPI 2022-11-01 /pmc/articles/PMC9698820/ /pubmed/36366529 http://dx.doi.org/10.3390/v14112431 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zheng, Jing
Chen, Wenyuan
Xiao, Hao
Yang, Fan
Li, Xiaowu
Song, Jingdong
Cheng, Lingpeng
Liu, Hongrong
A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9
title A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9
title_full A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9
title_fullStr A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9
title_full_unstemmed A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9
title_short A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9
title_sort capsid structure of ralstonia solanacearum podoviridae gp4 with a triangulation number t = 9
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9698820/
https://www.ncbi.nlm.nih.gov/pubmed/36366529
http://dx.doi.org/10.3390/v14112431
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