Cargando…
A Web-Based Automated Image Processing Research Platform for Cochlear Implantation-Related Studies
The robust delineation of the cochlea and its inner structures combined with the detection of the electrode of a cochlear implant within these structures is essential for envisaging a safer, more individualized, routine image-guided cochlear implant therapy. We present Nautilus—a web-based research...
Autores principales: | , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9699139/ https://www.ncbi.nlm.nih.gov/pubmed/36431117 http://dx.doi.org/10.3390/jcm11226640 |
_version_ | 1784838997960294400 |
---|---|
author | Margeta, Jan Hussain, Raabid López Diez, Paula Morgenstern, Anika Demarcy, Thomas Wang, Zihao Gnansia, Dan Martinez Manzanera, Octavio Vandersteen, Clair Delingette, Hervé Buechner, Andreas Lenarz, Thomas Patou, François Guevara, Nicolas |
author_facet | Margeta, Jan Hussain, Raabid López Diez, Paula Morgenstern, Anika Demarcy, Thomas Wang, Zihao Gnansia, Dan Martinez Manzanera, Octavio Vandersteen, Clair Delingette, Hervé Buechner, Andreas Lenarz, Thomas Patou, François Guevara, Nicolas |
author_sort | Margeta, Jan |
collection | PubMed |
description | The robust delineation of the cochlea and its inner structures combined with the detection of the electrode of a cochlear implant within these structures is essential for envisaging a safer, more individualized, routine image-guided cochlear implant therapy. We present Nautilus—a web-based research platform for automated pre- and post-implantation cochlear analysis. Nautilus delineates cochlear structures from pre-operative clinical CT images by combining deep learning and Bayesian inference approaches. It enables the extraction of electrode locations from a post-operative CT image using convolutional neural networks and geometrical inference. By fusing pre- and post-operative images, Nautilus is able to provide a set of personalized pre- and post-operative metrics that can serve the exploration of clinically relevant questions in cochlear implantation therapy. In addition, Nautilus embeds a self-assessment module providing a confidence rating on the outputs of its pipeline. We present a detailed accuracy and robustness analyses of the tool on a carefully designed dataset. The results of these analyses provide legitimate grounds for envisaging the implementation of image-guided cochlear implant practices into routine clinical workflows. |
format | Online Article Text |
id | pubmed-9699139 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-96991392022-11-26 A Web-Based Automated Image Processing Research Platform for Cochlear Implantation-Related Studies Margeta, Jan Hussain, Raabid López Diez, Paula Morgenstern, Anika Demarcy, Thomas Wang, Zihao Gnansia, Dan Martinez Manzanera, Octavio Vandersteen, Clair Delingette, Hervé Buechner, Andreas Lenarz, Thomas Patou, François Guevara, Nicolas J Clin Med Article The robust delineation of the cochlea and its inner structures combined with the detection of the electrode of a cochlear implant within these structures is essential for envisaging a safer, more individualized, routine image-guided cochlear implant therapy. We present Nautilus—a web-based research platform for automated pre- and post-implantation cochlear analysis. Nautilus delineates cochlear structures from pre-operative clinical CT images by combining deep learning and Bayesian inference approaches. It enables the extraction of electrode locations from a post-operative CT image using convolutional neural networks and geometrical inference. By fusing pre- and post-operative images, Nautilus is able to provide a set of personalized pre- and post-operative metrics that can serve the exploration of clinically relevant questions in cochlear implantation therapy. In addition, Nautilus embeds a self-assessment module providing a confidence rating on the outputs of its pipeline. We present a detailed accuracy and robustness analyses of the tool on a carefully designed dataset. The results of these analyses provide legitimate grounds for envisaging the implementation of image-guided cochlear implant practices into routine clinical workflows. MDPI 2022-11-09 /pmc/articles/PMC9699139/ /pubmed/36431117 http://dx.doi.org/10.3390/jcm11226640 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Margeta, Jan Hussain, Raabid López Diez, Paula Morgenstern, Anika Demarcy, Thomas Wang, Zihao Gnansia, Dan Martinez Manzanera, Octavio Vandersteen, Clair Delingette, Hervé Buechner, Andreas Lenarz, Thomas Patou, François Guevara, Nicolas A Web-Based Automated Image Processing Research Platform for Cochlear Implantation-Related Studies |
title | A Web-Based Automated Image Processing Research Platform for Cochlear Implantation-Related Studies |
title_full | A Web-Based Automated Image Processing Research Platform for Cochlear Implantation-Related Studies |
title_fullStr | A Web-Based Automated Image Processing Research Platform for Cochlear Implantation-Related Studies |
title_full_unstemmed | A Web-Based Automated Image Processing Research Platform for Cochlear Implantation-Related Studies |
title_short | A Web-Based Automated Image Processing Research Platform for Cochlear Implantation-Related Studies |
title_sort | web-based automated image processing research platform for cochlear implantation-related studies |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9699139/ https://www.ncbi.nlm.nih.gov/pubmed/36431117 http://dx.doi.org/10.3390/jcm11226640 |
work_keys_str_mv | AT margetajan awebbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT hussainraabid awebbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT lopezdiezpaula awebbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT morgensternanika awebbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT demarcythomas awebbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT wangzihao awebbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT gnansiadan awebbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT martinezmanzaneraoctavio awebbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT vandersteenclair awebbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT delingetteherve awebbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT buechnerandreas awebbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT lenarzthomas awebbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT patoufrancois awebbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT guevaranicolas awebbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT margetajan webbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT hussainraabid webbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT lopezdiezpaula webbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT morgensternanika webbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT demarcythomas webbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT wangzihao webbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT gnansiadan webbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT martinezmanzaneraoctavio webbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT vandersteenclair webbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT delingetteherve webbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT buechnerandreas webbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT lenarzthomas webbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT patoufrancois webbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies AT guevaranicolas webbasedautomatedimageprocessingresearchplatformforcochlearimplantationrelatedstudies |