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Genome-Wide Characterization, Identification and Expression Profile of MYB Transcription Factor Gene Family during Abiotic and Biotic Stresses in Mango (Mangifera indica)
Mango (Mangifera indica) is an economically important fruit tree, and is cultivated in tropical, subtropical, and dry-hot valley areas around the world. Mango fruits have high nutritional value, and are mainly consumed fresh and used for commercial purposes. Mango is affected by various environmenta...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9699602/ https://www.ncbi.nlm.nih.gov/pubmed/36432870 http://dx.doi.org/10.3390/plants11223141 |
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author | Zhang, He Liu, Zhixin Luo, Ruixiong Sun, Yu Yang, Cuifeng Li, Xi Gao, Aiping Pu, Jinji |
author_facet | Zhang, He Liu, Zhixin Luo, Ruixiong Sun, Yu Yang, Cuifeng Li, Xi Gao, Aiping Pu, Jinji |
author_sort | Zhang, He |
collection | PubMed |
description | Mango (Mangifera indica) is an economically important fruit tree, and is cultivated in tropical, subtropical, and dry-hot valley areas around the world. Mango fruits have high nutritional value, and are mainly consumed fresh and used for commercial purposes. Mango is affected by various environmental factors during its growth and development. The MYB transcription factors participates in various physiological activities of plants, such as phytohormone signal transduction and disease resistance. In this study, 54 MiMYB transcription factors were identified in the mango genome (371.6 Mb). A phylogenetic tree was drawn based on the amino acid sequences of 222 MYB proteins of mango and Arabidopsis. The phylogenetic tree showed that the members of the mango MYB gene family were divided into 7 group, including Groups 1, -3, -4, -5, -6, -8, and -9. Ka/Ks ratios generally indicated that the MiMYBs of mango were affected by negative or positive selection. Quantitative real-time PCR showed that the transcription levels of MiMYBs were different under abiotic and biotic stresses, including salicylic acid, methyl jasmonate, and H(2)O(2) treatments, and Colletotrichum gloeosporioides and Xanthomonas campestris pv. mangiferaeindicae infection, respectively. The transcript levels of MiMYB5, -35, -36, and -54 simultaneously responded positively to early treatments with salicylic acid, methyl jasmonate, and H(2)O(2.) The transcript level of MiMYB54 was activated by pathogenic fungal and bacterial infection. These results are beneficial for future interested researchers aiming to understand the biological functions and molecular mechanisms of MiMYB genes. |
format | Online Article Text |
id | pubmed-9699602 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-96996022022-11-26 Genome-Wide Characterization, Identification and Expression Profile of MYB Transcription Factor Gene Family during Abiotic and Biotic Stresses in Mango (Mangifera indica) Zhang, He Liu, Zhixin Luo, Ruixiong Sun, Yu Yang, Cuifeng Li, Xi Gao, Aiping Pu, Jinji Plants (Basel) Article Mango (Mangifera indica) is an economically important fruit tree, and is cultivated in tropical, subtropical, and dry-hot valley areas around the world. Mango fruits have high nutritional value, and are mainly consumed fresh and used for commercial purposes. Mango is affected by various environmental factors during its growth and development. The MYB transcription factors participates in various physiological activities of plants, such as phytohormone signal transduction and disease resistance. In this study, 54 MiMYB transcription factors were identified in the mango genome (371.6 Mb). A phylogenetic tree was drawn based on the amino acid sequences of 222 MYB proteins of mango and Arabidopsis. The phylogenetic tree showed that the members of the mango MYB gene family were divided into 7 group, including Groups 1, -3, -4, -5, -6, -8, and -9. Ka/Ks ratios generally indicated that the MiMYBs of mango were affected by negative or positive selection. Quantitative real-time PCR showed that the transcription levels of MiMYBs were different under abiotic and biotic stresses, including salicylic acid, methyl jasmonate, and H(2)O(2) treatments, and Colletotrichum gloeosporioides and Xanthomonas campestris pv. mangiferaeindicae infection, respectively. The transcript levels of MiMYB5, -35, -36, and -54 simultaneously responded positively to early treatments with salicylic acid, methyl jasmonate, and H(2)O(2.) The transcript level of MiMYB54 was activated by pathogenic fungal and bacterial infection. These results are beneficial for future interested researchers aiming to understand the biological functions and molecular mechanisms of MiMYB genes. MDPI 2022-11-16 /pmc/articles/PMC9699602/ /pubmed/36432870 http://dx.doi.org/10.3390/plants11223141 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zhang, He Liu, Zhixin Luo, Ruixiong Sun, Yu Yang, Cuifeng Li, Xi Gao, Aiping Pu, Jinji Genome-Wide Characterization, Identification and Expression Profile of MYB Transcription Factor Gene Family during Abiotic and Biotic Stresses in Mango (Mangifera indica) |
title | Genome-Wide Characterization, Identification and Expression Profile of MYB Transcription Factor Gene Family during Abiotic and Biotic Stresses in Mango (Mangifera indica) |
title_full | Genome-Wide Characterization, Identification and Expression Profile of MYB Transcription Factor Gene Family during Abiotic and Biotic Stresses in Mango (Mangifera indica) |
title_fullStr | Genome-Wide Characterization, Identification and Expression Profile of MYB Transcription Factor Gene Family during Abiotic and Biotic Stresses in Mango (Mangifera indica) |
title_full_unstemmed | Genome-Wide Characterization, Identification and Expression Profile of MYB Transcription Factor Gene Family during Abiotic and Biotic Stresses in Mango (Mangifera indica) |
title_short | Genome-Wide Characterization, Identification and Expression Profile of MYB Transcription Factor Gene Family during Abiotic and Biotic Stresses in Mango (Mangifera indica) |
title_sort | genome-wide characterization, identification and expression profile of myb transcription factor gene family during abiotic and biotic stresses in mango (mangifera indica) |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9699602/ https://www.ncbi.nlm.nih.gov/pubmed/36432870 http://dx.doi.org/10.3390/plants11223141 |
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