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Detecting Parkinson’s disease and its cognitive phenotypes via automated semantic analyses of action stories
Action-concept outcomes are useful targets to identify Parkinson’s disease (PD) patients and differentiate between those with and without mild cognitive impairment (PD-MCI, PD-nMCI). Yet, most approaches employ burdensome examiner-dependent tasks, limiting their utility. We introduce a framework cap...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9700793/ https://www.ncbi.nlm.nih.gov/pubmed/36434017 http://dx.doi.org/10.1038/s41531-022-00422-8 |
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author | García, Adolfo M. Escobar-Grisales, Daniel Vásquez Correa, Juan Camilo Bocanegra, Yamile Moreno, Leonardo Carmona, Jairo Orozco-Arroyave, Juan Rafael |
author_facet | García, Adolfo M. Escobar-Grisales, Daniel Vásquez Correa, Juan Camilo Bocanegra, Yamile Moreno, Leonardo Carmona, Jairo Orozco-Arroyave, Juan Rafael |
author_sort | García, Adolfo M. |
collection | PubMed |
description | Action-concept outcomes are useful targets to identify Parkinson’s disease (PD) patients and differentiate between those with and without mild cognitive impairment (PD-MCI, PD-nMCI). Yet, most approaches employ burdensome examiner-dependent tasks, limiting their utility. We introduce a framework capturing action-concept markers automatically in natural speech. Patients from both subgroups and controls retold an action-laden and a non-action-laden text (AT, nAT). In each retelling, we weighed action and non-action concepts through our automated Proximity-to-Reference-Semantic-Field (P-RSF) metric, for analysis via ANCOVAs (controlling for cognitive dysfunction) and support vector machines. Patients were differentiated from controls based on AT (but not nAT) P-RSF scores. The same occurred in PD-nMCI patients. Conversely, PD-MCI patients exhibited reduced P-RSF scores for both texts. Direct discrimination between patient subgroups was not systematic, but it yielded best outcomes via AT scores. Our approach outperformed classifiers based on corpus-derived embeddings. This framework opens scalable avenues to support PD diagnosis and phenotyping. |
format | Online Article Text |
id | pubmed-9700793 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-97007932022-11-27 Detecting Parkinson’s disease and its cognitive phenotypes via automated semantic analyses of action stories García, Adolfo M. Escobar-Grisales, Daniel Vásquez Correa, Juan Camilo Bocanegra, Yamile Moreno, Leonardo Carmona, Jairo Orozco-Arroyave, Juan Rafael NPJ Parkinsons Dis Article Action-concept outcomes are useful targets to identify Parkinson’s disease (PD) patients and differentiate between those with and without mild cognitive impairment (PD-MCI, PD-nMCI). Yet, most approaches employ burdensome examiner-dependent tasks, limiting their utility. We introduce a framework capturing action-concept markers automatically in natural speech. Patients from both subgroups and controls retold an action-laden and a non-action-laden text (AT, nAT). In each retelling, we weighed action and non-action concepts through our automated Proximity-to-Reference-Semantic-Field (P-RSF) metric, for analysis via ANCOVAs (controlling for cognitive dysfunction) and support vector machines. Patients were differentiated from controls based on AT (but not nAT) P-RSF scores. The same occurred in PD-nMCI patients. Conversely, PD-MCI patients exhibited reduced P-RSF scores for both texts. Direct discrimination between patient subgroups was not systematic, but it yielded best outcomes via AT scores. Our approach outperformed classifiers based on corpus-derived embeddings. This framework opens scalable avenues to support PD diagnosis and phenotyping. Nature Publishing Group UK 2022-11-25 /pmc/articles/PMC9700793/ /pubmed/36434017 http://dx.doi.org/10.1038/s41531-022-00422-8 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article García, Adolfo M. Escobar-Grisales, Daniel Vásquez Correa, Juan Camilo Bocanegra, Yamile Moreno, Leonardo Carmona, Jairo Orozco-Arroyave, Juan Rafael Detecting Parkinson’s disease and its cognitive phenotypes via automated semantic analyses of action stories |
title | Detecting Parkinson’s disease and its cognitive phenotypes via automated semantic analyses of action stories |
title_full | Detecting Parkinson’s disease and its cognitive phenotypes via automated semantic analyses of action stories |
title_fullStr | Detecting Parkinson’s disease and its cognitive phenotypes via automated semantic analyses of action stories |
title_full_unstemmed | Detecting Parkinson’s disease and its cognitive phenotypes via automated semantic analyses of action stories |
title_short | Detecting Parkinson’s disease and its cognitive phenotypes via automated semantic analyses of action stories |
title_sort | detecting parkinson’s disease and its cognitive phenotypes via automated semantic analyses of action stories |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9700793/ https://www.ncbi.nlm.nih.gov/pubmed/36434017 http://dx.doi.org/10.1038/s41531-022-00422-8 |
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