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Discovery and biosynthesis of macrophasetins from the plant pathogen fungus Macrophomina phaseolina

3-Decalinoyltetramic acids (DTAs) are a class of natural products with chemical diversity and potent bioactivities. In fungal species there is a general biosynthetic route to synthesize this type of compounds, which usually features a polyketide synthase-nonribosomal peptide synthetase (PKS-NRPS) an...

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Autores principales: Yu, Cui, Chen, Lin, Gao, Yang Le, Liu, Jia, Li, Pei Lin, Zhang, Ming Liang, Li, Qin, Zhang, Huai Dong, Tang, Man Cheng, Li, Li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9701702/
https://www.ncbi.nlm.nih.gov/pubmed/36452919
http://dx.doi.org/10.3389/fmicb.2022.1056392
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author Yu, Cui
Chen, Lin
Gao, Yang Le
Liu, Jia
Li, Pei Lin
Zhang, Ming Liang
Li, Qin
Zhang, Huai Dong
Tang, Man Cheng
Li, Li
author_facet Yu, Cui
Chen, Lin
Gao, Yang Le
Liu, Jia
Li, Pei Lin
Zhang, Ming Liang
Li, Qin
Zhang, Huai Dong
Tang, Man Cheng
Li, Li
author_sort Yu, Cui
collection PubMed
description 3-Decalinoyltetramic acids (DTAs) are a class of natural products with chemical diversity and potent bioactivities. In fungal species there is a general biosynthetic route to synthesize this type of compounds, which usually features a polyketide synthase-nonribosomal peptide synthetase (PKS-NRPS) and a lipocalin-like Diels-Alderase (LLDAse). Using a synthetic biology approach, combining the bioinformatics analysis prediction and heterologous expression, we mined a PKS-NRPS and LLDAse encoding gene cluster from the plant pathogenic fungus Macrophomina phaseolina and characterized the cluster to be responsible for the biosynthesis of novel DTAs, macrophasetins. In addition, we investigated the biosynthesis of these compounds and validated the accuracy of the phylogeny-guided bioinformatics analysis prediction. Our results provided a proof of concept example to this approach, which may facilitate the discovery of novel DTAs from the fungal kingdom.
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spelling pubmed-97017022022-11-29 Discovery and biosynthesis of macrophasetins from the plant pathogen fungus Macrophomina phaseolina Yu, Cui Chen, Lin Gao, Yang Le Liu, Jia Li, Pei Lin Zhang, Ming Liang Li, Qin Zhang, Huai Dong Tang, Man Cheng Li, Li Front Microbiol Microbiology 3-Decalinoyltetramic acids (DTAs) are a class of natural products with chemical diversity and potent bioactivities. In fungal species there is a general biosynthetic route to synthesize this type of compounds, which usually features a polyketide synthase-nonribosomal peptide synthetase (PKS-NRPS) and a lipocalin-like Diels-Alderase (LLDAse). Using a synthetic biology approach, combining the bioinformatics analysis prediction and heterologous expression, we mined a PKS-NRPS and LLDAse encoding gene cluster from the plant pathogenic fungus Macrophomina phaseolina and characterized the cluster to be responsible for the biosynthesis of novel DTAs, macrophasetins. In addition, we investigated the biosynthesis of these compounds and validated the accuracy of the phylogeny-guided bioinformatics analysis prediction. Our results provided a proof of concept example to this approach, which may facilitate the discovery of novel DTAs from the fungal kingdom. Frontiers Media S.A. 2022-11-14 /pmc/articles/PMC9701702/ /pubmed/36452919 http://dx.doi.org/10.3389/fmicb.2022.1056392 Text en Copyright © 2022 Yu, Chen, Gao, Liu, Li, Zhang, Li, Zhang, Tang and Li. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Yu, Cui
Chen, Lin
Gao, Yang Le
Liu, Jia
Li, Pei Lin
Zhang, Ming Liang
Li, Qin
Zhang, Huai Dong
Tang, Man Cheng
Li, Li
Discovery and biosynthesis of macrophasetins from the plant pathogen fungus Macrophomina phaseolina
title Discovery and biosynthesis of macrophasetins from the plant pathogen fungus Macrophomina phaseolina
title_full Discovery and biosynthesis of macrophasetins from the plant pathogen fungus Macrophomina phaseolina
title_fullStr Discovery and biosynthesis of macrophasetins from the plant pathogen fungus Macrophomina phaseolina
title_full_unstemmed Discovery and biosynthesis of macrophasetins from the plant pathogen fungus Macrophomina phaseolina
title_short Discovery and biosynthesis of macrophasetins from the plant pathogen fungus Macrophomina phaseolina
title_sort discovery and biosynthesis of macrophasetins from the plant pathogen fungus macrophomina phaseolina
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9701702/
https://www.ncbi.nlm.nih.gov/pubmed/36452919
http://dx.doi.org/10.3389/fmicb.2022.1056392
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