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Discovery and biosynthesis of macrophasetins from the plant pathogen fungus Macrophomina phaseolina
3-Decalinoyltetramic acids (DTAs) are a class of natural products with chemical diversity and potent bioactivities. In fungal species there is a general biosynthetic route to synthesize this type of compounds, which usually features a polyketide synthase-nonribosomal peptide synthetase (PKS-NRPS) an...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9701702/ https://www.ncbi.nlm.nih.gov/pubmed/36452919 http://dx.doi.org/10.3389/fmicb.2022.1056392 |
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author | Yu, Cui Chen, Lin Gao, Yang Le Liu, Jia Li, Pei Lin Zhang, Ming Liang Li, Qin Zhang, Huai Dong Tang, Man Cheng Li, Li |
author_facet | Yu, Cui Chen, Lin Gao, Yang Le Liu, Jia Li, Pei Lin Zhang, Ming Liang Li, Qin Zhang, Huai Dong Tang, Man Cheng Li, Li |
author_sort | Yu, Cui |
collection | PubMed |
description | 3-Decalinoyltetramic acids (DTAs) are a class of natural products with chemical diversity and potent bioactivities. In fungal species there is a general biosynthetic route to synthesize this type of compounds, which usually features a polyketide synthase-nonribosomal peptide synthetase (PKS-NRPS) and a lipocalin-like Diels-Alderase (LLDAse). Using a synthetic biology approach, combining the bioinformatics analysis prediction and heterologous expression, we mined a PKS-NRPS and LLDAse encoding gene cluster from the plant pathogenic fungus Macrophomina phaseolina and characterized the cluster to be responsible for the biosynthesis of novel DTAs, macrophasetins. In addition, we investigated the biosynthesis of these compounds and validated the accuracy of the phylogeny-guided bioinformatics analysis prediction. Our results provided a proof of concept example to this approach, which may facilitate the discovery of novel DTAs from the fungal kingdom. |
format | Online Article Text |
id | pubmed-9701702 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-97017022022-11-29 Discovery and biosynthesis of macrophasetins from the plant pathogen fungus Macrophomina phaseolina Yu, Cui Chen, Lin Gao, Yang Le Liu, Jia Li, Pei Lin Zhang, Ming Liang Li, Qin Zhang, Huai Dong Tang, Man Cheng Li, Li Front Microbiol Microbiology 3-Decalinoyltetramic acids (DTAs) are a class of natural products with chemical diversity and potent bioactivities. In fungal species there is a general biosynthetic route to synthesize this type of compounds, which usually features a polyketide synthase-nonribosomal peptide synthetase (PKS-NRPS) and a lipocalin-like Diels-Alderase (LLDAse). Using a synthetic biology approach, combining the bioinformatics analysis prediction and heterologous expression, we mined a PKS-NRPS and LLDAse encoding gene cluster from the plant pathogenic fungus Macrophomina phaseolina and characterized the cluster to be responsible for the biosynthesis of novel DTAs, macrophasetins. In addition, we investigated the biosynthesis of these compounds and validated the accuracy of the phylogeny-guided bioinformatics analysis prediction. Our results provided a proof of concept example to this approach, which may facilitate the discovery of novel DTAs from the fungal kingdom. Frontiers Media S.A. 2022-11-14 /pmc/articles/PMC9701702/ /pubmed/36452919 http://dx.doi.org/10.3389/fmicb.2022.1056392 Text en Copyright © 2022 Yu, Chen, Gao, Liu, Li, Zhang, Li, Zhang, Tang and Li. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Yu, Cui Chen, Lin Gao, Yang Le Liu, Jia Li, Pei Lin Zhang, Ming Liang Li, Qin Zhang, Huai Dong Tang, Man Cheng Li, Li Discovery and biosynthesis of macrophasetins from the plant pathogen fungus Macrophomina phaseolina |
title | Discovery and biosynthesis of macrophasetins from the plant pathogen fungus Macrophomina phaseolina |
title_full | Discovery and biosynthesis of macrophasetins from the plant pathogen fungus Macrophomina phaseolina |
title_fullStr | Discovery and biosynthesis of macrophasetins from the plant pathogen fungus Macrophomina phaseolina |
title_full_unstemmed | Discovery and biosynthesis of macrophasetins from the plant pathogen fungus Macrophomina phaseolina |
title_short | Discovery and biosynthesis of macrophasetins from the plant pathogen fungus Macrophomina phaseolina |
title_sort | discovery and biosynthesis of macrophasetins from the plant pathogen fungus macrophomina phaseolina |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9701702/ https://www.ncbi.nlm.nih.gov/pubmed/36452919 http://dx.doi.org/10.3389/fmicb.2022.1056392 |
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