Cargando…
Identification of a ferroptosis-related long noncoding RNA signature with a prognostic value in adrenocortical carcinoma
Background: Adrenocortical carcinoma (ACC) is an uncommon endocrine malignancy associated with poor clinical outcome. As a novel form of cell death, ferroptosis is reliant on the accumulation of iron and reactive oxygen species and is involved in the pathogenesis of various tumors, including ACC. Ou...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9705333/ https://www.ncbi.nlm.nih.gov/pubmed/36457749 http://dx.doi.org/10.3389/fgene.2022.949457 |
_version_ | 1784840259382542336 |
---|---|
author | Wang, Weixi Chang, Guilin Zhuo, Ran Ye, Cong |
author_facet | Wang, Weixi Chang, Guilin Zhuo, Ran Ye, Cong |
author_sort | Wang, Weixi |
collection | PubMed |
description | Background: Adrenocortical carcinoma (ACC) is an uncommon endocrine malignancy associated with poor clinical outcome. As a novel form of cell death, ferroptosis is reliant on the accumulation of iron and reactive oxygen species and is involved in the pathogenesis of various tumors, including ACC. Our study aimed to identify and characterize the prognostic ferroptosis-related lncRNA signature (FerRLSig) in ACC. Methods: A regulatory network of ferroptosis-related lncRNAs (FerRLs) and mRNAs was constructed based on The Cancer Genome Atlas (TCGA). Univariate and multivariate Cox regression assays were performed to construct the FerRLSig. Results: Twenty-four FerRLs were identified in the prognostic model, and the high-risk FerRLSig was related to the worse overall survival (OS) in ACC [hazard ratio (HR): 1.936 (1.484–2.526), p < 0.001]. The area under the curve (AUC) value of the FerRLSig was 0.936 according to the receiver operating characteristic (ROC) analyses, superior to other traditional clinicopathological features, further supported the utility in prognosis prediction of ACC. We further established a prognostic nomogram combining clinical factors with the FerRLSig, which showed favorable efficacy for survival prediction. Next, gene set enrichment analysis (GSEA) revealed that gene sets were involved in many immune regulatory biological processes related to malignancies. T-cell function of type II INF response and the immune checkpoints, including CD40, CD276, IDO2, NRP1, and CD80, were expressed with a significant difference between the low- and high-risk groups. Conclusion: This study offered new insights into the pathogenesis of ACC. The novel FerRLSig could be useful in predicting survival and may provide information of immunological research and treatment for ACC patients. |
format | Online Article Text |
id | pubmed-9705333 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-97053332022-11-30 Identification of a ferroptosis-related long noncoding RNA signature with a prognostic value in adrenocortical carcinoma Wang, Weixi Chang, Guilin Zhuo, Ran Ye, Cong Front Genet Genetics Background: Adrenocortical carcinoma (ACC) is an uncommon endocrine malignancy associated with poor clinical outcome. As a novel form of cell death, ferroptosis is reliant on the accumulation of iron and reactive oxygen species and is involved in the pathogenesis of various tumors, including ACC. Our study aimed to identify and characterize the prognostic ferroptosis-related lncRNA signature (FerRLSig) in ACC. Methods: A regulatory network of ferroptosis-related lncRNAs (FerRLs) and mRNAs was constructed based on The Cancer Genome Atlas (TCGA). Univariate and multivariate Cox regression assays were performed to construct the FerRLSig. Results: Twenty-four FerRLs were identified in the prognostic model, and the high-risk FerRLSig was related to the worse overall survival (OS) in ACC [hazard ratio (HR): 1.936 (1.484–2.526), p < 0.001]. The area under the curve (AUC) value of the FerRLSig was 0.936 according to the receiver operating characteristic (ROC) analyses, superior to other traditional clinicopathological features, further supported the utility in prognosis prediction of ACC. We further established a prognostic nomogram combining clinical factors with the FerRLSig, which showed favorable efficacy for survival prediction. Next, gene set enrichment analysis (GSEA) revealed that gene sets were involved in many immune regulatory biological processes related to malignancies. T-cell function of type II INF response and the immune checkpoints, including CD40, CD276, IDO2, NRP1, and CD80, were expressed with a significant difference between the low- and high-risk groups. Conclusion: This study offered new insights into the pathogenesis of ACC. The novel FerRLSig could be useful in predicting survival and may provide information of immunological research and treatment for ACC patients. Frontiers Media S.A. 2022-11-15 /pmc/articles/PMC9705333/ /pubmed/36457749 http://dx.doi.org/10.3389/fgene.2022.949457 Text en Copyright © 2022 Wang, Chang, Zhuo and Ye. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Wang, Weixi Chang, Guilin Zhuo, Ran Ye, Cong Identification of a ferroptosis-related long noncoding RNA signature with a prognostic value in adrenocortical carcinoma |
title | Identification of a ferroptosis-related long noncoding RNA signature with a prognostic value in adrenocortical carcinoma |
title_full | Identification of a ferroptosis-related long noncoding RNA signature with a prognostic value in adrenocortical carcinoma |
title_fullStr | Identification of a ferroptosis-related long noncoding RNA signature with a prognostic value in adrenocortical carcinoma |
title_full_unstemmed | Identification of a ferroptosis-related long noncoding RNA signature with a prognostic value in adrenocortical carcinoma |
title_short | Identification of a ferroptosis-related long noncoding RNA signature with a prognostic value in adrenocortical carcinoma |
title_sort | identification of a ferroptosis-related long noncoding rna signature with a prognostic value in adrenocortical carcinoma |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9705333/ https://www.ncbi.nlm.nih.gov/pubmed/36457749 http://dx.doi.org/10.3389/fgene.2022.949457 |
work_keys_str_mv | AT wangweixi identificationofaferroptosisrelatedlongnoncodingrnasignaturewithaprognosticvalueinadrenocorticalcarcinoma AT changguilin identificationofaferroptosisrelatedlongnoncodingrnasignaturewithaprognosticvalueinadrenocorticalcarcinoma AT zhuoran identificationofaferroptosisrelatedlongnoncodingrnasignaturewithaprognosticvalueinadrenocorticalcarcinoma AT yecong identificationofaferroptosisrelatedlongnoncodingrnasignaturewithaprognosticvalueinadrenocorticalcarcinoma |