Cargando…
Machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study
BACKGROUND: Acute pancreatitis (AP) with critical illness is linked to increased morbidity and mortality. Current risk scores to identify high-risk AP patients have certain limitations. OBJECTIVE: To develop and validate a machine learning tool within 48 h after admission for predicting which patien...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9707001/ https://www.ncbi.nlm.nih.gov/pubmed/36447180 http://dx.doi.org/10.1186/s12911-022-02066-3 |
_version_ | 1784840625121656832 |
---|---|
author | Yuan, Lei Ji, Mengyao Wang, Shuo Wen, Xinyu Huang, Pingxiao Shen, Lei Xu, Jun |
author_facet | Yuan, Lei Ji, Mengyao Wang, Shuo Wen, Xinyu Huang, Pingxiao Shen, Lei Xu, Jun |
author_sort | Yuan, Lei |
collection | PubMed |
description | BACKGROUND: Acute pancreatitis (AP) with critical illness is linked to increased morbidity and mortality. Current risk scores to identify high-risk AP patients have certain limitations. OBJECTIVE: To develop and validate a machine learning tool within 48 h after admission for predicting which patients with AP will develop critical illness based on ubiquitously available clinical, laboratory, and radiologic variables. METHODS: 5460 AP patients were enrolled. Clinical, laboratory, and imaging variables were collected within 48 h after hospital admission. Least Absolute Shrinkage Selection Operator with bootstrap method was employed to select the most informative variables. Five different machine learning models were constructed to predictive likelihood of critical illness, and the optimal model (APCU) was selected. External cohort was used to validate APCU. APCU and other risk scores were compared using multivariate analysis. Models were evaluated by area under the curve (AUC). The decision curve analysis was employed to evaluate the standardized net benefit. RESULTS: Xgboost was constructed and selected as APCU, involving age, comorbid disease, mental status, pulmonary infiltrates, procalcitonin (PCT), neutrophil percentage (Neu%), ALT/AST, ratio of albumin and globulin, cholinesterase, Urea, Glu, AST and serum total cholesterol. The APCU performed excellently in discriminating AP risk in internal cohort (AUC = 0.95) and external cohort (AUC = 0.873). The APCU was significant for biliogenic AP (OR = 4.25 [2.08–8.72], P < 0.001), alcoholic AP (OR = 3.60 [1.67–7.72], P = 0.001), hyperlipidemic AP (OR = 2.63 [1.28–5.37], P = 0.008) and tumor AP (OR = 4.57 [2.14–9.72], P < 0.001). APCU yielded the highest clinical net benefit, comparatively. CONCLUSION: Machine learning tool based on ubiquitously available clinical variables accurately predicts the development of AP, optimizing the management of AP. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12911-022-02066-3. |
format | Online Article Text |
id | pubmed-9707001 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-97070012022-11-30 Machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study Yuan, Lei Ji, Mengyao Wang, Shuo Wen, Xinyu Huang, Pingxiao Shen, Lei Xu, Jun BMC Med Inform Decis Mak Research BACKGROUND: Acute pancreatitis (AP) with critical illness is linked to increased morbidity and mortality. Current risk scores to identify high-risk AP patients have certain limitations. OBJECTIVE: To develop and validate a machine learning tool within 48 h after admission for predicting which patients with AP will develop critical illness based on ubiquitously available clinical, laboratory, and radiologic variables. METHODS: 5460 AP patients were enrolled. Clinical, laboratory, and imaging variables were collected within 48 h after hospital admission. Least Absolute Shrinkage Selection Operator with bootstrap method was employed to select the most informative variables. Five different machine learning models were constructed to predictive likelihood of critical illness, and the optimal model (APCU) was selected. External cohort was used to validate APCU. APCU and other risk scores were compared using multivariate analysis. Models were evaluated by area under the curve (AUC). The decision curve analysis was employed to evaluate the standardized net benefit. RESULTS: Xgboost was constructed and selected as APCU, involving age, comorbid disease, mental status, pulmonary infiltrates, procalcitonin (PCT), neutrophil percentage (Neu%), ALT/AST, ratio of albumin and globulin, cholinesterase, Urea, Glu, AST and serum total cholesterol. The APCU performed excellently in discriminating AP risk in internal cohort (AUC = 0.95) and external cohort (AUC = 0.873). The APCU was significant for biliogenic AP (OR = 4.25 [2.08–8.72], P < 0.001), alcoholic AP (OR = 3.60 [1.67–7.72], P = 0.001), hyperlipidemic AP (OR = 2.63 [1.28–5.37], P = 0.008) and tumor AP (OR = 4.57 [2.14–9.72], P < 0.001). APCU yielded the highest clinical net benefit, comparatively. CONCLUSION: Machine learning tool based on ubiquitously available clinical variables accurately predicts the development of AP, optimizing the management of AP. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12911-022-02066-3. BioMed Central 2022-11-29 /pmc/articles/PMC9707001/ /pubmed/36447180 http://dx.doi.org/10.1186/s12911-022-02066-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Yuan, Lei Ji, Mengyao Wang, Shuo Wen, Xinyu Huang, Pingxiao Shen, Lei Xu, Jun Machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study |
title | Machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study |
title_full | Machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study |
title_fullStr | Machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study |
title_full_unstemmed | Machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study |
title_short | Machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study |
title_sort | machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9707001/ https://www.ncbi.nlm.nih.gov/pubmed/36447180 http://dx.doi.org/10.1186/s12911-022-02066-3 |
work_keys_str_mv | AT yuanlei machinelearningmodelidentifiesaggressiveacutepancreatitiswithin48hofadmissionalargeretrospectivestudy AT jimengyao machinelearningmodelidentifiesaggressiveacutepancreatitiswithin48hofadmissionalargeretrospectivestudy AT wangshuo machinelearningmodelidentifiesaggressiveacutepancreatitiswithin48hofadmissionalargeretrospectivestudy AT wenxinyu machinelearningmodelidentifiesaggressiveacutepancreatitiswithin48hofadmissionalargeretrospectivestudy AT huangpingxiao machinelearningmodelidentifiesaggressiveacutepancreatitiswithin48hofadmissionalargeretrospectivestudy AT shenlei machinelearningmodelidentifiesaggressiveacutepancreatitiswithin48hofadmissionalargeretrospectivestudy AT xujun machinelearningmodelidentifiesaggressiveacutepancreatitiswithin48hofadmissionalargeretrospectivestudy |