Cargando…

Machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study

BACKGROUND: Acute pancreatitis (AP) with critical illness is linked to increased morbidity and mortality. Current risk scores to identify high-risk AP patients have certain limitations. OBJECTIVE: To develop and validate a machine learning tool within 48 h after admission for predicting which patien...

Descripción completa

Detalles Bibliográficos
Autores principales: Yuan, Lei, Ji, Mengyao, Wang, Shuo, Wen, Xinyu, Huang, Pingxiao, Shen, Lei, Xu, Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9707001/
https://www.ncbi.nlm.nih.gov/pubmed/36447180
http://dx.doi.org/10.1186/s12911-022-02066-3
_version_ 1784840625121656832
author Yuan, Lei
Ji, Mengyao
Wang, Shuo
Wen, Xinyu
Huang, Pingxiao
Shen, Lei
Xu, Jun
author_facet Yuan, Lei
Ji, Mengyao
Wang, Shuo
Wen, Xinyu
Huang, Pingxiao
Shen, Lei
Xu, Jun
author_sort Yuan, Lei
collection PubMed
description BACKGROUND: Acute pancreatitis (AP) with critical illness is linked to increased morbidity and mortality. Current risk scores to identify high-risk AP patients have certain limitations. OBJECTIVE: To develop and validate a machine learning tool within 48 h after admission for predicting which patients with AP will develop critical illness based on ubiquitously available clinical, laboratory, and radiologic variables. METHODS: 5460 AP patients were enrolled. Clinical, laboratory, and imaging variables were collected within 48 h after hospital admission. Least Absolute Shrinkage Selection Operator with bootstrap method was employed to select the most informative variables. Five different machine learning models were constructed to predictive likelihood of critical illness, and the optimal model (APCU) was selected. External cohort was used to validate APCU. APCU and other risk scores were compared using multivariate analysis. Models were evaluated by area under the curve (AUC). The decision curve analysis was employed to evaluate the standardized net benefit. RESULTS: Xgboost was constructed and selected as APCU, involving age, comorbid disease, mental status, pulmonary infiltrates, procalcitonin (PCT), neutrophil percentage (Neu%), ALT/AST, ratio of albumin and globulin, cholinesterase, Urea, Glu, AST and serum total cholesterol. The APCU performed excellently in discriminating AP risk in internal cohort (AUC = 0.95) and external cohort (AUC = 0.873). The APCU was significant for biliogenic AP (OR = 4.25 [2.08–8.72], P < 0.001), alcoholic AP (OR = 3.60 [1.67–7.72], P = 0.001), hyperlipidemic AP (OR = 2.63 [1.28–5.37], P = 0.008) and tumor AP (OR = 4.57 [2.14–9.72], P < 0.001). APCU yielded the highest clinical net benefit, comparatively. CONCLUSION: Machine learning tool based on ubiquitously available clinical variables accurately predicts the development of AP, optimizing the management of AP. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12911-022-02066-3.
format Online
Article
Text
id pubmed-9707001
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-97070012022-11-30 Machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study Yuan, Lei Ji, Mengyao Wang, Shuo Wen, Xinyu Huang, Pingxiao Shen, Lei Xu, Jun BMC Med Inform Decis Mak Research BACKGROUND: Acute pancreatitis (AP) with critical illness is linked to increased morbidity and mortality. Current risk scores to identify high-risk AP patients have certain limitations. OBJECTIVE: To develop and validate a machine learning tool within 48 h after admission for predicting which patients with AP will develop critical illness based on ubiquitously available clinical, laboratory, and radiologic variables. METHODS: 5460 AP patients were enrolled. Clinical, laboratory, and imaging variables were collected within 48 h after hospital admission. Least Absolute Shrinkage Selection Operator with bootstrap method was employed to select the most informative variables. Five different machine learning models were constructed to predictive likelihood of critical illness, and the optimal model (APCU) was selected. External cohort was used to validate APCU. APCU and other risk scores were compared using multivariate analysis. Models were evaluated by area under the curve (AUC). The decision curve analysis was employed to evaluate the standardized net benefit. RESULTS: Xgboost was constructed and selected as APCU, involving age, comorbid disease, mental status, pulmonary infiltrates, procalcitonin (PCT), neutrophil percentage (Neu%), ALT/AST, ratio of albumin and globulin, cholinesterase, Urea, Glu, AST and serum total cholesterol. The APCU performed excellently in discriminating AP risk in internal cohort (AUC = 0.95) and external cohort (AUC = 0.873). The APCU was significant for biliogenic AP (OR = 4.25 [2.08–8.72], P < 0.001), alcoholic AP (OR = 3.60 [1.67–7.72], P = 0.001), hyperlipidemic AP (OR = 2.63 [1.28–5.37], P = 0.008) and tumor AP (OR = 4.57 [2.14–9.72], P < 0.001). APCU yielded the highest clinical net benefit, comparatively. CONCLUSION: Machine learning tool based on ubiquitously available clinical variables accurately predicts the development of AP, optimizing the management of AP. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12911-022-02066-3. BioMed Central 2022-11-29 /pmc/articles/PMC9707001/ /pubmed/36447180 http://dx.doi.org/10.1186/s12911-022-02066-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Yuan, Lei
Ji, Mengyao
Wang, Shuo
Wen, Xinyu
Huang, Pingxiao
Shen, Lei
Xu, Jun
Machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study
title Machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study
title_full Machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study
title_fullStr Machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study
title_full_unstemmed Machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study
title_short Machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study
title_sort machine learning model identifies aggressive acute pancreatitis within 48 h of admission: a large retrospective study
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9707001/
https://www.ncbi.nlm.nih.gov/pubmed/36447180
http://dx.doi.org/10.1186/s12911-022-02066-3
work_keys_str_mv AT yuanlei machinelearningmodelidentifiesaggressiveacutepancreatitiswithin48hofadmissionalargeretrospectivestudy
AT jimengyao machinelearningmodelidentifiesaggressiveacutepancreatitiswithin48hofadmissionalargeretrospectivestudy
AT wangshuo machinelearningmodelidentifiesaggressiveacutepancreatitiswithin48hofadmissionalargeretrospectivestudy
AT wenxinyu machinelearningmodelidentifiesaggressiveacutepancreatitiswithin48hofadmissionalargeretrospectivestudy
AT huangpingxiao machinelearningmodelidentifiesaggressiveacutepancreatitiswithin48hofadmissionalargeretrospectivestudy
AT shenlei machinelearningmodelidentifiesaggressiveacutepancreatitiswithin48hofadmissionalargeretrospectivestudy
AT xujun machinelearningmodelidentifiesaggressiveacutepancreatitiswithin48hofadmissionalargeretrospectivestudy