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Meta-DiSc 2.0: a web application for meta-analysis of diagnostic test accuracy data

BACKGROUND: Diagnostic evidence of the accuracy of a test for identifying a target condition of interest can be estimated using systematic approaches following standardized methodologies. Statistical methods for the meta-analysis of diagnostic test accuracy (DTA) studies are relatively complex, pres...

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Autores principales: Plana, Maria N., Arevalo-Rodriguez, Ingrid, Fernández-García, Silvia, Soto, Javier, Fabregate, Martin, Pérez, Teresa, Roqué, Marta, Zamora, Javier
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9707040/
https://www.ncbi.nlm.nih.gov/pubmed/36443653
http://dx.doi.org/10.1186/s12874-022-01788-2
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author Plana, Maria N.
Arevalo-Rodriguez, Ingrid
Fernández-García, Silvia
Soto, Javier
Fabregate, Martin
Pérez, Teresa
Roqué, Marta
Zamora, Javier
author_facet Plana, Maria N.
Arevalo-Rodriguez, Ingrid
Fernández-García, Silvia
Soto, Javier
Fabregate, Martin
Pérez, Teresa
Roqué, Marta
Zamora, Javier
author_sort Plana, Maria N.
collection PubMed
description BACKGROUND: Diagnostic evidence of the accuracy of a test for identifying a target condition of interest can be estimated using systematic approaches following standardized methodologies. Statistical methods for the meta-analysis of diagnostic test accuracy (DTA) studies are relatively complex, presenting a challenge for reviewers without extensive statistical expertise. In 2006, we developed Meta-DiSc, a free user-friendly software to perform test accuracy meta-analysis. This statistical program is now widely used for performing DTA meta-analyses. We aimed to build a new version of the Meta-DiSc software to include statistical methods based on hierarchical models and an enhanced web-based interface to improve user experience. RESULTS: In this article, we present the updated version, Meta-DiSc 2.0, a web-based application developed using the R Shiny package. This new version implements recommended state-of-the-art statistical models to overcome the limitations of the statistical approaches included in the previous version. Meta-DiSc 2.0 performs statistical analyses of DTA reviews using a bivariate random effects model. The application offers a thorough analysis of heterogeneity, calculating logit variance estimates of sensitivity and specificity, the bivariate I-squared, the area of the 95% prediction ellipse, and the median odds ratios for sensitivity and specificity, and facilitating subgroup and meta-regression analyses. Furthermore, univariate random effects models can be applied to meta-analyses with few studies or with non-convergent bivariate models. The application interface has an intuitive design set out in four main menus: file upload; graphical description (forest and ROC plane plots); meta-analysis (pooling of sensitivity and specificity, estimation of likelihood ratios and diagnostic odds ratio, sROC curve); and summary of findings (impact of test through downstream consequences in a hypothetical population with a given prevalence). All computational algorithms have been validated in several real datasets by comparing results obtained with STATA/SAS and MetaDTA packages. CONCLUSION: We have developed and validated an updated version of the Meta-DiSc software that is more accessible and statistically sound. The web application is freely available at www.metadisc.es.
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spelling pubmed-97070402022-11-30 Meta-DiSc 2.0: a web application for meta-analysis of diagnostic test accuracy data Plana, Maria N. Arevalo-Rodriguez, Ingrid Fernández-García, Silvia Soto, Javier Fabregate, Martin Pérez, Teresa Roqué, Marta Zamora, Javier BMC Med Res Methodol Software BACKGROUND: Diagnostic evidence of the accuracy of a test for identifying a target condition of interest can be estimated using systematic approaches following standardized methodologies. Statistical methods for the meta-analysis of diagnostic test accuracy (DTA) studies are relatively complex, presenting a challenge for reviewers without extensive statistical expertise. In 2006, we developed Meta-DiSc, a free user-friendly software to perform test accuracy meta-analysis. This statistical program is now widely used for performing DTA meta-analyses. We aimed to build a new version of the Meta-DiSc software to include statistical methods based on hierarchical models and an enhanced web-based interface to improve user experience. RESULTS: In this article, we present the updated version, Meta-DiSc 2.0, a web-based application developed using the R Shiny package. This new version implements recommended state-of-the-art statistical models to overcome the limitations of the statistical approaches included in the previous version. Meta-DiSc 2.0 performs statistical analyses of DTA reviews using a bivariate random effects model. The application offers a thorough analysis of heterogeneity, calculating logit variance estimates of sensitivity and specificity, the bivariate I-squared, the area of the 95% prediction ellipse, and the median odds ratios for sensitivity and specificity, and facilitating subgroup and meta-regression analyses. Furthermore, univariate random effects models can be applied to meta-analyses with few studies or with non-convergent bivariate models. The application interface has an intuitive design set out in four main menus: file upload; graphical description (forest and ROC plane plots); meta-analysis (pooling of sensitivity and specificity, estimation of likelihood ratios and diagnostic odds ratio, sROC curve); and summary of findings (impact of test through downstream consequences in a hypothetical population with a given prevalence). All computational algorithms have been validated in several real datasets by comparing results obtained with STATA/SAS and MetaDTA packages. CONCLUSION: We have developed and validated an updated version of the Meta-DiSc software that is more accessible and statistically sound. The web application is freely available at www.metadisc.es. BioMed Central 2022-11-28 /pmc/articles/PMC9707040/ /pubmed/36443653 http://dx.doi.org/10.1186/s12874-022-01788-2 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Software
Plana, Maria N.
Arevalo-Rodriguez, Ingrid
Fernández-García, Silvia
Soto, Javier
Fabregate, Martin
Pérez, Teresa
Roqué, Marta
Zamora, Javier
Meta-DiSc 2.0: a web application for meta-analysis of diagnostic test accuracy data
title Meta-DiSc 2.0: a web application for meta-analysis of diagnostic test accuracy data
title_full Meta-DiSc 2.0: a web application for meta-analysis of diagnostic test accuracy data
title_fullStr Meta-DiSc 2.0: a web application for meta-analysis of diagnostic test accuracy data
title_full_unstemmed Meta-DiSc 2.0: a web application for meta-analysis of diagnostic test accuracy data
title_short Meta-DiSc 2.0: a web application for meta-analysis of diagnostic test accuracy data
title_sort meta-disc 2.0: a web application for meta-analysis of diagnostic test accuracy data
topic Software
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9707040/
https://www.ncbi.nlm.nih.gov/pubmed/36443653
http://dx.doi.org/10.1186/s12874-022-01788-2
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