Cargando…

Random forest model can predict the prognosis of hospital-acquired Klebsiella pneumoniae infection as well as traditional logistic regression model

OBJECTIVE: To explore if random forest (RF) model can predict the prognosis of hospital-acquired Klebsiella pneumoniae infection as well as traditional logistic regression(LR) model. METHODS: A total of 254 cases of hospital-acquired Klebsiella pneumoniae infection in a tertiary hospital in Beijing...

Descripción completa

Detalles Bibliográficos
Autores principales: Fan, Shuaihua, Lin, Jinlan, Wu, Sheng, Mu, Xiangdong, Guo, Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9707746/
https://www.ncbi.nlm.nih.gov/pubmed/36445863
http://dx.doi.org/10.1371/journal.pone.0278123
_version_ 1784840762992623616
author Fan, Shuaihua
Lin, Jinlan
Wu, Sheng
Mu, Xiangdong
Guo, Jun
author_facet Fan, Shuaihua
Lin, Jinlan
Wu, Sheng
Mu, Xiangdong
Guo, Jun
author_sort Fan, Shuaihua
collection PubMed
description OBJECTIVE: To explore if random forest (RF) model can predict the prognosis of hospital-acquired Klebsiella pneumoniae infection as well as traditional logistic regression(LR) model. METHODS: A total of 254 cases of hospital-acquired Klebsiella pneumoniae infection in a tertiary hospital in Beijing from January 2016 to December 2020 were retrospectively collected. Appropriate influencing factors were selected by referring to relevant articles from the aspects of basic clinical information and contact history before infection, and divided into a training set and a test set. Both the RF and LR models were trained by the training set, and using testing set to compare these two models. RESULTS: The prediction accuracy of the LR model was 87.0%, the true positive rate of the LR model was 94.7%; the false negative rate of the LR model was 5.3%; the false positive rate of the LR model was 35%; the true negative rate of the LR model was 65%; the sensitivity of the LR model for the prognosis prediction of hospital-acquired Klebsiella pneumoniae infection was 94.7%; and the specificity was 65%. The prediction accuracy of the RF model was 89.6%; the true positive rate of the RF model was 92.1%; the false negative rate of the RF model was 7.9%; the false positive rate of the RF model was 21.4%; the true negative rate of the RF model was 78.6%; the sensitivity of the RF model for the prognosis prediction of hospital-acquired Klebsiella pneumoniae infection was 92.1%; and the specificity was 78.6%. ROC curve shows that the area under curve(AUC) of the LR model was 0.91, and that of the RF model was 0.95. CONCLUSION: The RF model has higher specificity, sensitivity, and accuracy for the prognostic prediction of hospital-acquired Klebsiella pneumoniae infection than the LR model and has greater clinical application prospects.
format Online
Article
Text
id pubmed-9707746
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-97077462022-11-30 Random forest model can predict the prognosis of hospital-acquired Klebsiella pneumoniae infection as well as traditional logistic regression model Fan, Shuaihua Lin, Jinlan Wu, Sheng Mu, Xiangdong Guo, Jun PLoS One Research Article OBJECTIVE: To explore if random forest (RF) model can predict the prognosis of hospital-acquired Klebsiella pneumoniae infection as well as traditional logistic regression(LR) model. METHODS: A total of 254 cases of hospital-acquired Klebsiella pneumoniae infection in a tertiary hospital in Beijing from January 2016 to December 2020 were retrospectively collected. Appropriate influencing factors were selected by referring to relevant articles from the aspects of basic clinical information and contact history before infection, and divided into a training set and a test set. Both the RF and LR models were trained by the training set, and using testing set to compare these two models. RESULTS: The prediction accuracy of the LR model was 87.0%, the true positive rate of the LR model was 94.7%; the false negative rate of the LR model was 5.3%; the false positive rate of the LR model was 35%; the true negative rate of the LR model was 65%; the sensitivity of the LR model for the prognosis prediction of hospital-acquired Klebsiella pneumoniae infection was 94.7%; and the specificity was 65%. The prediction accuracy of the RF model was 89.6%; the true positive rate of the RF model was 92.1%; the false negative rate of the RF model was 7.9%; the false positive rate of the RF model was 21.4%; the true negative rate of the RF model was 78.6%; the sensitivity of the RF model for the prognosis prediction of hospital-acquired Klebsiella pneumoniae infection was 92.1%; and the specificity was 78.6%. ROC curve shows that the area under curve(AUC) of the LR model was 0.91, and that of the RF model was 0.95. CONCLUSION: The RF model has higher specificity, sensitivity, and accuracy for the prognostic prediction of hospital-acquired Klebsiella pneumoniae infection than the LR model and has greater clinical application prospects. Public Library of Science 2022-11-29 /pmc/articles/PMC9707746/ /pubmed/36445863 http://dx.doi.org/10.1371/journal.pone.0278123 Text en © 2022 Fan et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Fan, Shuaihua
Lin, Jinlan
Wu, Sheng
Mu, Xiangdong
Guo, Jun
Random forest model can predict the prognosis of hospital-acquired Klebsiella pneumoniae infection as well as traditional logistic regression model
title Random forest model can predict the prognosis of hospital-acquired Klebsiella pneumoniae infection as well as traditional logistic regression model
title_full Random forest model can predict the prognosis of hospital-acquired Klebsiella pneumoniae infection as well as traditional logistic regression model
title_fullStr Random forest model can predict the prognosis of hospital-acquired Klebsiella pneumoniae infection as well as traditional logistic regression model
title_full_unstemmed Random forest model can predict the prognosis of hospital-acquired Klebsiella pneumoniae infection as well as traditional logistic regression model
title_short Random forest model can predict the prognosis of hospital-acquired Klebsiella pneumoniae infection as well as traditional logistic regression model
title_sort random forest model can predict the prognosis of hospital-acquired klebsiella pneumoniae infection as well as traditional logistic regression model
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9707746/
https://www.ncbi.nlm.nih.gov/pubmed/36445863
http://dx.doi.org/10.1371/journal.pone.0278123
work_keys_str_mv AT fanshuaihua randomforestmodelcanpredicttheprognosisofhospitalacquiredklebsiellapneumoniaeinfectionaswellastraditionallogisticregressionmodel
AT linjinlan randomforestmodelcanpredicttheprognosisofhospitalacquiredklebsiellapneumoniaeinfectionaswellastraditionallogisticregressionmodel
AT wusheng randomforestmodelcanpredicttheprognosisofhospitalacquiredklebsiellapneumoniaeinfectionaswellastraditionallogisticregressionmodel
AT muxiangdong randomforestmodelcanpredicttheprognosisofhospitalacquiredklebsiellapneumoniaeinfectionaswellastraditionallogisticregressionmodel
AT guojun randomforestmodelcanpredicttheprognosisofhospitalacquiredklebsiellapneumoniaeinfectionaswellastraditionallogisticregressionmodel