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The Time and Place for Nature in Drug Discovery

[Image: see text] The case for a renewed focus on Nature in drug discovery is reviewed; not in terms of natural product screening, but how and why biomimetic molecules, especially those produced by natural processes, should deliver in the age of artificial intelligence and screening of vast collecti...

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Autores principales: Young, Robert J., Flitsch, Sabine L., Grigalunas, Michael, Leeson, Paul D., Quinn, Ronald J., Turner, Nicholas J., Waldmann, Herbert
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9709949/
https://www.ncbi.nlm.nih.gov/pubmed/36465532
http://dx.doi.org/10.1021/jacsau.2c00415
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author Young, Robert J.
Flitsch, Sabine L.
Grigalunas, Michael
Leeson, Paul D.
Quinn, Ronald J.
Turner, Nicholas J.
Waldmann, Herbert
author_facet Young, Robert J.
Flitsch, Sabine L.
Grigalunas, Michael
Leeson, Paul D.
Quinn, Ronald J.
Turner, Nicholas J.
Waldmann, Herbert
author_sort Young, Robert J.
collection PubMed
description [Image: see text] The case for a renewed focus on Nature in drug discovery is reviewed; not in terms of natural product screening, but how and why biomimetic molecules, especially those produced by natural processes, should deliver in the age of artificial intelligence and screening of vast collections both in vitro and in silico. The declining natural product-likeness of licensed drugs and the consequent physicochemical implications of this trend in the context of current practices are noted. To arrest these trends, the logic of seeking new bioactive agents with enhanced natural mimicry is considered; notably that molecules constructed by proteins (enzymes) are more likely to interact with other proteins (e.g., targets and transporters), a notion validated by natural products. Nature’s finite number of building blocks and their interactions necessarily reduce potential numbers of structures, yet these enable expansion of chemical space with their inherent diversity of physical characteristics, pertinent to property-based design. The feasible variations on natural motifs are considered and expanded to encompass pseudo-natural products, leading to the further logical step of harnessing bioprocessing routes to access them. Together, these offer opportunities for enhancing natural mimicry, thereby bringing innovation to drug synthesis exploiting the characteristics of natural recognition processes. The potential for computational guidance to help identifying binding commonalities in the route map is a logical opportunity to enable the design of tailored molecules, with a focus on “organic/biological” rather than purely “synthetic” structures. The design and synthesis of prototype structures should pay dividends in the disposition and efficacy of the molecules, while inherently enabling greener and more sustainable manufacturing techniques.
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spelling pubmed-97099492022-12-01 The Time and Place for Nature in Drug Discovery Young, Robert J. Flitsch, Sabine L. Grigalunas, Michael Leeson, Paul D. Quinn, Ronald J. Turner, Nicholas J. Waldmann, Herbert JACS Au [Image: see text] The case for a renewed focus on Nature in drug discovery is reviewed; not in terms of natural product screening, but how and why biomimetic molecules, especially those produced by natural processes, should deliver in the age of artificial intelligence and screening of vast collections both in vitro and in silico. The declining natural product-likeness of licensed drugs and the consequent physicochemical implications of this trend in the context of current practices are noted. To arrest these trends, the logic of seeking new bioactive agents with enhanced natural mimicry is considered; notably that molecules constructed by proteins (enzymes) are more likely to interact with other proteins (e.g., targets and transporters), a notion validated by natural products. Nature’s finite number of building blocks and their interactions necessarily reduce potential numbers of structures, yet these enable expansion of chemical space with their inherent diversity of physical characteristics, pertinent to property-based design. The feasible variations on natural motifs are considered and expanded to encompass pseudo-natural products, leading to the further logical step of harnessing bioprocessing routes to access them. Together, these offer opportunities for enhancing natural mimicry, thereby bringing innovation to drug synthesis exploiting the characteristics of natural recognition processes. The potential for computational guidance to help identifying binding commonalities in the route map is a logical opportunity to enable the design of tailored molecules, with a focus on “organic/biological” rather than purely “synthetic” structures. The design and synthesis of prototype structures should pay dividends in the disposition and efficacy of the molecules, while inherently enabling greener and more sustainable manufacturing techniques. American Chemical Society 2022-10-14 /pmc/articles/PMC9709949/ /pubmed/36465532 http://dx.doi.org/10.1021/jacsau.2c00415 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Young, Robert J.
Flitsch, Sabine L.
Grigalunas, Michael
Leeson, Paul D.
Quinn, Ronald J.
Turner, Nicholas J.
Waldmann, Herbert
The Time and Place for Nature in Drug Discovery
title The Time and Place for Nature in Drug Discovery
title_full The Time and Place for Nature in Drug Discovery
title_fullStr The Time and Place for Nature in Drug Discovery
title_full_unstemmed The Time and Place for Nature in Drug Discovery
title_short The Time and Place for Nature in Drug Discovery
title_sort time and place for nature in drug discovery
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9709949/
https://www.ncbi.nlm.nih.gov/pubmed/36465532
http://dx.doi.org/10.1021/jacsau.2c00415
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