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Guided discovery of chemical reaction pathways with imposed activation

Computational power and quantum chemical methods have improved immensely since computers were first applied to the study of reactivity, but the de novo prediction of chemical reactions has remained challenging. We show that complex reaction pathways can be efficiently predicted in a guided manner us...

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Autores principales: Lavigne, Cyrille, Gomes, Gabe, Pollice, Robert, Aspuru-Guzik, Alán
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9710306/
https://www.ncbi.nlm.nih.gov/pubmed/36544742
http://dx.doi.org/10.1039/d2sc05135d
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author Lavigne, Cyrille
Gomes, Gabe
Pollice, Robert
Aspuru-Guzik, Alán
author_facet Lavigne, Cyrille
Gomes, Gabe
Pollice, Robert
Aspuru-Guzik, Alán
author_sort Lavigne, Cyrille
collection PubMed
description Computational power and quantum chemical methods have improved immensely since computers were first applied to the study of reactivity, but the de novo prediction of chemical reactions has remained challenging. We show that complex reaction pathways can be efficiently predicted in a guided manner using chemical activation imposed by geometrical constraints of specific reactive modes, which we term imposed activation (IACTA). Our approach is demonstrated on realistic and challenging chemistry, such as a triple cyclization cascade involved in the total synthesis of a natural product, a water-mediated Michael addition, and several oxidative addition reactions of complex drug-like molecules. Notably and in contrast with traditional hand-guided computational chemistry calculations, our method requires minimal human involvement and no prior knowledge of the products or the associated mechanisms. We believe that IACTA will be a transformational tool to screen for chemical reactivity and to study both by-product formation and decomposition pathways in a guided way.
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spelling pubmed-97103062022-12-20 Guided discovery of chemical reaction pathways with imposed activation Lavigne, Cyrille Gomes, Gabe Pollice, Robert Aspuru-Guzik, Alán Chem Sci Chemistry Computational power and quantum chemical methods have improved immensely since computers were first applied to the study of reactivity, but the de novo prediction of chemical reactions has remained challenging. We show that complex reaction pathways can be efficiently predicted in a guided manner using chemical activation imposed by geometrical constraints of specific reactive modes, which we term imposed activation (IACTA). Our approach is demonstrated on realistic and challenging chemistry, such as a triple cyclization cascade involved in the total synthesis of a natural product, a water-mediated Michael addition, and several oxidative addition reactions of complex drug-like molecules. Notably and in contrast with traditional hand-guided computational chemistry calculations, our method requires minimal human involvement and no prior knowledge of the products or the associated mechanisms. We believe that IACTA will be a transformational tool to screen for chemical reactivity and to study both by-product formation and decomposition pathways in a guided way. The Royal Society of Chemistry 2022-11-10 /pmc/articles/PMC9710306/ /pubmed/36544742 http://dx.doi.org/10.1039/d2sc05135d Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/
spellingShingle Chemistry
Lavigne, Cyrille
Gomes, Gabe
Pollice, Robert
Aspuru-Guzik, Alán
Guided discovery of chemical reaction pathways with imposed activation
title Guided discovery of chemical reaction pathways with imposed activation
title_full Guided discovery of chemical reaction pathways with imposed activation
title_fullStr Guided discovery of chemical reaction pathways with imposed activation
title_full_unstemmed Guided discovery of chemical reaction pathways with imposed activation
title_short Guided discovery of chemical reaction pathways with imposed activation
title_sort guided discovery of chemical reaction pathways with imposed activation
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9710306/
https://www.ncbi.nlm.nih.gov/pubmed/36544742
http://dx.doi.org/10.1039/d2sc05135d
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