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Chemsearch: collaborative compound libraries with structure-aware browsing
SUMMARY: Chemsearch is a cross-platform server application for developing and managing a chemical compound library and associated data files, with an interface for browsing and search that allows for easy navigation to a compound of interest, similar compounds or compounds that have desired structur...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9710581/ https://www.ncbi.nlm.nih.gov/pubmed/36700113 http://dx.doi.org/10.1093/bioadv/vbab008 |
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author | Gaffney, Stephen G Smaga, Sarah Schepartz, Alanna Townsend, Jeffrey P |
author_facet | Gaffney, Stephen G Smaga, Sarah Schepartz, Alanna Townsend, Jeffrey P |
author_sort | Gaffney, Stephen G |
collection | PubMed |
description | SUMMARY: Chemsearch is a cross-platform server application for developing and managing a chemical compound library and associated data files, with an interface for browsing and search that allows for easy navigation to a compound of interest, similar compounds or compounds that have desired structural properties. With provisions for access control and centralized document and data storage, Chemsearch supports collaboration by distributed teams. AVAILABILITY AND IMPLEMENTATION: Chemsearch is a free and open-source Flask web application that can be linked to a Google Workspace account. Source code is available at https://github.com/gem-net/chemsearch (GPLv3 license). A Docker image allowing rapid deployment is available at https://hub.docker.com/r/cgemcci/chemsearch. |
format | Online Article Text |
id | pubmed-9710581 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-97105812023-01-24 Chemsearch: collaborative compound libraries with structure-aware browsing Gaffney, Stephen G Smaga, Sarah Schepartz, Alanna Townsend, Jeffrey P Bioinform Adv Applications Note SUMMARY: Chemsearch is a cross-platform server application for developing and managing a chemical compound library and associated data files, with an interface for browsing and search that allows for easy navigation to a compound of interest, similar compounds or compounds that have desired structural properties. With provisions for access control and centralized document and data storage, Chemsearch supports collaboration by distributed teams. AVAILABILITY AND IMPLEMENTATION: Chemsearch is a free and open-source Flask web application that can be linked to a Google Workspace account. Source code is available at https://github.com/gem-net/chemsearch (GPLv3 license). A Docker image allowing rapid deployment is available at https://hub.docker.com/r/cgemcci/chemsearch. Oxford University Press 2021-07-16 /pmc/articles/PMC9710581/ /pubmed/36700113 http://dx.doi.org/10.1093/bioadv/vbab008 Text en © The Author(s) 2021. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Applications Note Gaffney, Stephen G Smaga, Sarah Schepartz, Alanna Townsend, Jeffrey P Chemsearch: collaborative compound libraries with structure-aware browsing |
title | Chemsearch: collaborative compound libraries with structure-aware browsing |
title_full | Chemsearch: collaborative compound libraries with structure-aware browsing |
title_fullStr | Chemsearch: collaborative compound libraries with structure-aware browsing |
title_full_unstemmed | Chemsearch: collaborative compound libraries with structure-aware browsing |
title_short | Chemsearch: collaborative compound libraries with structure-aware browsing |
title_sort | chemsearch: collaborative compound libraries with structure-aware browsing |
topic | Applications Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9710581/ https://www.ncbi.nlm.nih.gov/pubmed/36700113 http://dx.doi.org/10.1093/bioadv/vbab008 |
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