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beeRapp: an R shiny app for automated high-throughput explorative analysis of multivariate behavioral data

SUMMARY: Animal behavioral studies typically generate high-dimensional datasets consisting of multiple correlated outcome measures across distinct or related behavioral domains. Here, we introduce the BEhavioral Explorative analysis R shiny APP (beeRapp) that facilitates explorative and inferential...

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Detalles Bibliográficos
Autores principales: Busch, Anne Marie, Kovlyagina, Irina, Lutz, Beat, Todorov, Hristo, Gerber, Susanne
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9710645/
https://www.ncbi.nlm.nih.gov/pubmed/36699414
http://dx.doi.org/10.1093/bioadv/vbac082
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author Busch, Anne Marie
Kovlyagina, Irina
Lutz, Beat
Todorov, Hristo
Gerber, Susanne
author_facet Busch, Anne Marie
Kovlyagina, Irina
Lutz, Beat
Todorov, Hristo
Gerber, Susanne
author_sort Busch, Anne Marie
collection PubMed
description SUMMARY: Animal behavioral studies typically generate high-dimensional datasets consisting of multiple correlated outcome measures across distinct or related behavioral domains. Here, we introduce the BEhavioral Explorative analysis R shiny APP (beeRapp) that facilitates explorative and inferential analysis of behavioral data in a high-throughput fashion. By employing an intuitive and user-friendly graphical user interface, beeRapp empowers behavioral scientists without programming and data science expertise to perform clustering, dimensionality reduction, correlational and inferential statistics and produce up to thousands of high-quality output plots visualizing results in a standardized and automated way. AVAILABILITY AND IMPLEMENTATION: The code and data underlying this article are available at https://github.com/anmabu/beeRapp.
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spelling pubmed-97106452023-01-24 beeRapp: an R shiny app for automated high-throughput explorative analysis of multivariate behavioral data Busch, Anne Marie Kovlyagina, Irina Lutz, Beat Todorov, Hristo Gerber, Susanne Bioinform Adv Application Note SUMMARY: Animal behavioral studies typically generate high-dimensional datasets consisting of multiple correlated outcome measures across distinct or related behavioral domains. Here, we introduce the BEhavioral Explorative analysis R shiny APP (beeRapp) that facilitates explorative and inferential analysis of behavioral data in a high-throughput fashion. By employing an intuitive and user-friendly graphical user interface, beeRapp empowers behavioral scientists without programming and data science expertise to perform clustering, dimensionality reduction, correlational and inferential statistics and produce up to thousands of high-quality output plots visualizing results in a standardized and automated way. AVAILABILITY AND IMPLEMENTATION: The code and data underlying this article are available at https://github.com/anmabu/beeRapp. Oxford University Press 2022-11-07 /pmc/articles/PMC9710645/ /pubmed/36699414 http://dx.doi.org/10.1093/bioadv/vbac082 Text en © The Author(s) 2022. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Application Note
Busch, Anne Marie
Kovlyagina, Irina
Lutz, Beat
Todorov, Hristo
Gerber, Susanne
beeRapp: an R shiny app for automated high-throughput explorative analysis of multivariate behavioral data
title beeRapp: an R shiny app for automated high-throughput explorative analysis of multivariate behavioral data
title_full beeRapp: an R shiny app for automated high-throughput explorative analysis of multivariate behavioral data
title_fullStr beeRapp: an R shiny app for automated high-throughput explorative analysis of multivariate behavioral data
title_full_unstemmed beeRapp: an R shiny app for automated high-throughput explorative analysis of multivariate behavioral data
title_short beeRapp: an R shiny app for automated high-throughput explorative analysis of multivariate behavioral data
title_sort beerapp: an r shiny app for automated high-throughput explorative analysis of multivariate behavioral data
topic Application Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9710645/
https://www.ncbi.nlm.nih.gov/pubmed/36699414
http://dx.doi.org/10.1093/bioadv/vbac082
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