Cargando…

Cuprotosis Patterns Are Associated with Tumor Mutation Burden and Immune Landscape in Lung Adenocarcinoma

BACKGROUND: The association involving cuprotosis, molecular subtype, and specific immune cell groups in the tumor microenvironment has been focused on by more recent studies. In lung adenocarcinoma (LUAD), the potential functions of cuprotosis remain elusive. METHODS: The cuprotosis regulations and...

Descripción completa

Detalles Bibliográficos
Autores principales: Liu, Tingting, Cai, Liangliang, Hua, Hujia, Jiang, Xingyu, Xu, Xintian, Zhang, Tianyi, Huang, Wenqing, Qian, Li, Bai, Hua, Duan, Jianchun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9711958/
https://www.ncbi.nlm.nih.gov/pubmed/36467497
http://dx.doi.org/10.1155/2022/9772208
_version_ 1784841690166591488
author Liu, Tingting
Cai, Liangliang
Hua, Hujia
Jiang, Xingyu
Xu, Xintian
Zhang, Tianyi
Huang, Wenqing
Qian, Li
Bai, Hua
Duan, Jianchun
author_facet Liu, Tingting
Cai, Liangliang
Hua, Hujia
Jiang, Xingyu
Xu, Xintian
Zhang, Tianyi
Huang, Wenqing
Qian, Li
Bai, Hua
Duan, Jianchun
author_sort Liu, Tingting
collection PubMed
description BACKGROUND: The association involving cuprotosis, molecular subtype, and specific immune cell groups in the tumor microenvironment has been focused on by more recent studies. In lung adenocarcinoma (LUAD), the potential functions of cuprotosis remain elusive. METHODS: The cuprotosis regulations and tumor immune profile of 567 LUAD patients and the correlation between the cuprotosis patterns and the immune landscape were comprehensively evaluated. The cuprotosisScore was calculated using principal component analysis (PCA). The prognostic significance of the cuprotosisScore was evaluated by Cox regression statistics analysis. RESULTS: Five cuprotosisClusters (named mc1, 2, 3, 4, 5)—characterized by differences in expression of immunomodulatory genes, mRNA, or lncRNA expression, and prognosis were identified. We established cuprotosisScore to quantify the cuprotosis pattern of individual LUAD patients. As is shown in further analyses, the cuprotosisScore was a relatively potential independent prognostic factor of LUAD involved in mc1. Finally, the prognostic value of the cuprotosisScore and its association with tumor immune microenvironment (iTME) of LUAD in five cuprotosisClusters were verified. CONCLUSIONS: We demonstrated the correlation between cuprotosis modification, the molecular subtype, and tumor immune landscape in LUAD. The cuprotosisCluster with high cuprotosisScore and high tumor mutation burden (TMB) was identified with a good prognosis and immune functions. The comprehensive evaluation of cuprotosis patterns in individual LUAD patients enhances the understanding of iTME and gives a new insight toward improved immune treatment strategies for LUAD patients.
format Online
Article
Text
id pubmed-9711958
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-97119582022-12-01 Cuprotosis Patterns Are Associated with Tumor Mutation Burden and Immune Landscape in Lung Adenocarcinoma Liu, Tingting Cai, Liangliang Hua, Hujia Jiang, Xingyu Xu, Xintian Zhang, Tianyi Huang, Wenqing Qian, Li Bai, Hua Duan, Jianchun J Oncol Research Article BACKGROUND: The association involving cuprotosis, molecular subtype, and specific immune cell groups in the tumor microenvironment has been focused on by more recent studies. In lung adenocarcinoma (LUAD), the potential functions of cuprotosis remain elusive. METHODS: The cuprotosis regulations and tumor immune profile of 567 LUAD patients and the correlation between the cuprotosis patterns and the immune landscape were comprehensively evaluated. The cuprotosisScore was calculated using principal component analysis (PCA). The prognostic significance of the cuprotosisScore was evaluated by Cox regression statistics analysis. RESULTS: Five cuprotosisClusters (named mc1, 2, 3, 4, 5)—characterized by differences in expression of immunomodulatory genes, mRNA, or lncRNA expression, and prognosis were identified. We established cuprotosisScore to quantify the cuprotosis pattern of individual LUAD patients. As is shown in further analyses, the cuprotosisScore was a relatively potential independent prognostic factor of LUAD involved in mc1. Finally, the prognostic value of the cuprotosisScore and its association with tumor immune microenvironment (iTME) of LUAD in five cuprotosisClusters were verified. CONCLUSIONS: We demonstrated the correlation between cuprotosis modification, the molecular subtype, and tumor immune landscape in LUAD. The cuprotosisCluster with high cuprotosisScore and high tumor mutation burden (TMB) was identified with a good prognosis and immune functions. The comprehensive evaluation of cuprotosis patterns in individual LUAD patients enhances the understanding of iTME and gives a new insight toward improved immune treatment strategies for LUAD patients. Hindawi 2022-11-23 /pmc/articles/PMC9711958/ /pubmed/36467497 http://dx.doi.org/10.1155/2022/9772208 Text en Copyright © 2022 Tingting Liu et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Liu, Tingting
Cai, Liangliang
Hua, Hujia
Jiang, Xingyu
Xu, Xintian
Zhang, Tianyi
Huang, Wenqing
Qian, Li
Bai, Hua
Duan, Jianchun
Cuprotosis Patterns Are Associated with Tumor Mutation Burden and Immune Landscape in Lung Adenocarcinoma
title Cuprotosis Patterns Are Associated with Tumor Mutation Burden and Immune Landscape in Lung Adenocarcinoma
title_full Cuprotosis Patterns Are Associated with Tumor Mutation Burden and Immune Landscape in Lung Adenocarcinoma
title_fullStr Cuprotosis Patterns Are Associated with Tumor Mutation Burden and Immune Landscape in Lung Adenocarcinoma
title_full_unstemmed Cuprotosis Patterns Are Associated with Tumor Mutation Burden and Immune Landscape in Lung Adenocarcinoma
title_short Cuprotosis Patterns Are Associated with Tumor Mutation Burden and Immune Landscape in Lung Adenocarcinoma
title_sort cuprotosis patterns are associated with tumor mutation burden and immune landscape in lung adenocarcinoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9711958/
https://www.ncbi.nlm.nih.gov/pubmed/36467497
http://dx.doi.org/10.1155/2022/9772208
work_keys_str_mv AT liutingting cuprotosispatternsareassociatedwithtumormutationburdenandimmunelandscapeinlungadenocarcinoma
AT cailiangliang cuprotosispatternsareassociatedwithtumormutationburdenandimmunelandscapeinlungadenocarcinoma
AT huahujia cuprotosispatternsareassociatedwithtumormutationburdenandimmunelandscapeinlungadenocarcinoma
AT jiangxingyu cuprotosispatternsareassociatedwithtumormutationburdenandimmunelandscapeinlungadenocarcinoma
AT xuxintian cuprotosispatternsareassociatedwithtumormutationburdenandimmunelandscapeinlungadenocarcinoma
AT zhangtianyi cuprotosispatternsareassociatedwithtumormutationburdenandimmunelandscapeinlungadenocarcinoma
AT huangwenqing cuprotosispatternsareassociatedwithtumormutationburdenandimmunelandscapeinlungadenocarcinoma
AT qianli cuprotosispatternsareassociatedwithtumormutationburdenandimmunelandscapeinlungadenocarcinoma
AT baihua cuprotosispatternsareassociatedwithtumormutationburdenandimmunelandscapeinlungadenocarcinoma
AT duanjianchun cuprotosispatternsareassociatedwithtumormutationburdenandimmunelandscapeinlungadenocarcinoma