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A PCR-based method for the diagnosis of Enterobius vermicularis in stool samples, specifically designed for clinical application

BACKGROUND: Enterobius vermicularis (E. vermicularis) is a nematode that infects up to 200 million people worldwide, despite effective medications being available. Conventional diagnostic tests are hindered by low sensitivity and poor patient compliance. Furthermore, no biomolecular techniques are a...

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Autores principales: Ummarino, Aldo, Caputo, Michele, Tucci, Francesco Antonio, Pezzicoli, Gaetano, Piepoli, Ada, Gentile, Annamaria, Latiano, Tiziana, Panza, Anna, Calà, Nicholas, Ceglia, Antonio Pio, Pistoio, Giovanni, Troiano, Vincenzo, Pucatti, Michela, Latiano, Anna, Andriulli, Angelo, Tucci, Antonio, Palmieri, Orazio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9712443/
https://www.ncbi.nlm.nih.gov/pubmed/36466657
http://dx.doi.org/10.3389/fmicb.2022.1028988
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author Ummarino, Aldo
Caputo, Michele
Tucci, Francesco Antonio
Pezzicoli, Gaetano
Piepoli, Ada
Gentile, Annamaria
Latiano, Tiziana
Panza, Anna
Calà, Nicholas
Ceglia, Antonio Pio
Pistoio, Giovanni
Troiano, Vincenzo
Pucatti, Michela
Latiano, Anna
Andriulli, Angelo
Tucci, Antonio
Palmieri, Orazio
author_facet Ummarino, Aldo
Caputo, Michele
Tucci, Francesco Antonio
Pezzicoli, Gaetano
Piepoli, Ada
Gentile, Annamaria
Latiano, Tiziana
Panza, Anna
Calà, Nicholas
Ceglia, Antonio Pio
Pistoio, Giovanni
Troiano, Vincenzo
Pucatti, Michela
Latiano, Anna
Andriulli, Angelo
Tucci, Antonio
Palmieri, Orazio
author_sort Ummarino, Aldo
collection PubMed
description BACKGROUND: Enterobius vermicularis (E. vermicularis) is a nematode that infects up to 200 million people worldwide, despite effective medications being available. Conventional diagnostic tests are hindered by low sensitivity and poor patient compliance. Furthermore, no biomolecular techniques are available for clinical application. The aim of this study was to develop a procedure specifically designed for clinical application to detect E. vermicularis by means of PCR. MATERIALS AND METHODS: Two subject groups were taken into account: a group of 27 infected patients and a control group of 27 healthy subjects. A nested-PCR was performed on fecal samples to detect E. vermicularis. Due to the intrinsic difficulties of the fecal matrix, several countermeasures were adopted to ensure the efficient performance of the method: (a) a large amount of feces for the extraction process (20 g instead of 200 mg); (b) a combination of chemical and physical treatments to grind the fecal matrix; (c) an additional purification process for the negative samples after the first nested-PCR; and (d) the selection of a very specific target region for the PCR. RESULTS: Due to the lack of overlap with other organisms, a sequence of the 5S ribosomal DNA (rDNA) spacer region including the tract SL1 was chosen to design appropriate external and internal primers. The first nested-PCR detected E.vermicularis in 19/27 samples from infected patients. After further purification, 5/8 of the negative samples resulted positive at the second PCR. Conversely, all the samples from healthy controls resulted negative to both PCRs. Sensitivity and specificity of the method were, respectively, 88.9% and 100%. CONCLUSION: The results prove the high diagnostic accuracy of the proposed method, addressing and overcoming the challenges posed by both conventional tests and PCR-based approaches. Therefore, the method can be proposed for clinical application.
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spelling pubmed-97124432022-12-02 A PCR-based method for the diagnosis of Enterobius vermicularis in stool samples, specifically designed for clinical application Ummarino, Aldo Caputo, Michele Tucci, Francesco Antonio Pezzicoli, Gaetano Piepoli, Ada Gentile, Annamaria Latiano, Tiziana Panza, Anna Calà, Nicholas Ceglia, Antonio Pio Pistoio, Giovanni Troiano, Vincenzo Pucatti, Michela Latiano, Anna Andriulli, Angelo Tucci, Antonio Palmieri, Orazio Front Microbiol Microbiology BACKGROUND: Enterobius vermicularis (E. vermicularis) is a nematode that infects up to 200 million people worldwide, despite effective medications being available. Conventional diagnostic tests are hindered by low sensitivity and poor patient compliance. Furthermore, no biomolecular techniques are available for clinical application. The aim of this study was to develop a procedure specifically designed for clinical application to detect E. vermicularis by means of PCR. MATERIALS AND METHODS: Two subject groups were taken into account: a group of 27 infected patients and a control group of 27 healthy subjects. A nested-PCR was performed on fecal samples to detect E. vermicularis. Due to the intrinsic difficulties of the fecal matrix, several countermeasures were adopted to ensure the efficient performance of the method: (a) a large amount of feces for the extraction process (20 g instead of 200 mg); (b) a combination of chemical and physical treatments to grind the fecal matrix; (c) an additional purification process for the negative samples after the first nested-PCR; and (d) the selection of a very specific target region for the PCR. RESULTS: Due to the lack of overlap with other organisms, a sequence of the 5S ribosomal DNA (rDNA) spacer region including the tract SL1 was chosen to design appropriate external and internal primers. The first nested-PCR detected E.vermicularis in 19/27 samples from infected patients. After further purification, 5/8 of the negative samples resulted positive at the second PCR. Conversely, all the samples from healthy controls resulted negative to both PCRs. Sensitivity and specificity of the method were, respectively, 88.9% and 100%. CONCLUSION: The results prove the high diagnostic accuracy of the proposed method, addressing and overcoming the challenges posed by both conventional tests and PCR-based approaches. Therefore, the method can be proposed for clinical application. Frontiers Media S.A. 2022-11-17 /pmc/articles/PMC9712443/ /pubmed/36466657 http://dx.doi.org/10.3389/fmicb.2022.1028988 Text en Copyright © 2022 Ummarino, Caputo, Tucci, Pezzicoli, Piepoli, Gentile, Latiano, Panza, Calà, Ceglia, Pistoio, Troiano, Pucatti, Latiano, Andriulli, Tucci and Palmieri. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Ummarino, Aldo
Caputo, Michele
Tucci, Francesco Antonio
Pezzicoli, Gaetano
Piepoli, Ada
Gentile, Annamaria
Latiano, Tiziana
Panza, Anna
Calà, Nicholas
Ceglia, Antonio Pio
Pistoio, Giovanni
Troiano, Vincenzo
Pucatti, Michela
Latiano, Anna
Andriulli, Angelo
Tucci, Antonio
Palmieri, Orazio
A PCR-based method for the diagnosis of Enterobius vermicularis in stool samples, specifically designed for clinical application
title A PCR-based method for the diagnosis of Enterobius vermicularis in stool samples, specifically designed for clinical application
title_full A PCR-based method for the diagnosis of Enterobius vermicularis in stool samples, specifically designed for clinical application
title_fullStr A PCR-based method for the diagnosis of Enterobius vermicularis in stool samples, specifically designed for clinical application
title_full_unstemmed A PCR-based method for the diagnosis of Enterobius vermicularis in stool samples, specifically designed for clinical application
title_short A PCR-based method for the diagnosis of Enterobius vermicularis in stool samples, specifically designed for clinical application
title_sort pcr-based method for the diagnosis of enterobius vermicularis in stool samples, specifically designed for clinical application
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9712443/
https://www.ncbi.nlm.nih.gov/pubmed/36466657
http://dx.doi.org/10.3389/fmicb.2022.1028988
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