Cargando…
Interpretable deep learning‐based hippocampal sclerosis classification
OBJECTIVE: To evaluate the performance of a deep learning model for hippocampal sclerosis classification on the clinical dataset and suggest plausible visual interpretation for the model prediction. METHODS: T2‐weighted oblique coronal images of the brain MRI epilepsy protocol performed on patients...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9712484/ https://www.ncbi.nlm.nih.gov/pubmed/36177546 http://dx.doi.org/10.1002/epi4.12655 |
_version_ | 1784841798516998144 |
---|---|
author | Kim, Dohyun Lee, Jungtae Moon, Jangsup Moon, Taesup |
author_facet | Kim, Dohyun Lee, Jungtae Moon, Jangsup Moon, Taesup |
author_sort | Kim, Dohyun |
collection | PubMed |
description | OBJECTIVE: To evaluate the performance of a deep learning model for hippocampal sclerosis classification on the clinical dataset and suggest plausible visual interpretation for the model prediction. METHODS: T2‐weighted oblique coronal images of the brain MRI epilepsy protocol performed on patients were used. The training set included 320 participants with 160 no, 100 left and 60 right hippocampal sclerosis, and cross‐validation was implemented. The test set consisted of 302 participants with 252 no, 25 left and 25 right hippocampal sclerosis. As the test set was imbalanced, we took an average of the accuracy achieved within each group to measure a balanced accuracy for multiclass and binary classifications. The dataset was composed to include not only healthy participants but also participants with abnormalities besides hippocampal sclerosis in the control group. We visualized the reasons for the model prediction using the layer‐wise relevance propagation method. RESULTS: When evaluated on the validation of the training set, we achieved multiclass and binary classification accuracy of 87.5% and 88.8% from the voting ensemble of six models. Evaluated on the test sets, we achieved multiclass and binary classification accuracy of 91.5% and 89.76%. The distinctly sparse visual interpretations were provided for each individual participant and group to suggest the contribution of each input voxel to the prediction on the MRI. SIGNIFICANCE: The current interpretable deep learning‐based model is promising for adapting effectively to clinical settings by utilizing commonly used data, such as MRI, with realistic abnormalities faced by neurologists to support the diagnosis of hippocampal sclerosis with plausible visual interpretation. |
format | Online Article Text |
id | pubmed-9712484 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-97124842022-12-02 Interpretable deep learning‐based hippocampal sclerosis classification Kim, Dohyun Lee, Jungtae Moon, Jangsup Moon, Taesup Epilepsia Open Original Articles OBJECTIVE: To evaluate the performance of a deep learning model for hippocampal sclerosis classification on the clinical dataset and suggest plausible visual interpretation for the model prediction. METHODS: T2‐weighted oblique coronal images of the brain MRI epilepsy protocol performed on patients were used. The training set included 320 participants with 160 no, 100 left and 60 right hippocampal sclerosis, and cross‐validation was implemented. The test set consisted of 302 participants with 252 no, 25 left and 25 right hippocampal sclerosis. As the test set was imbalanced, we took an average of the accuracy achieved within each group to measure a balanced accuracy for multiclass and binary classifications. The dataset was composed to include not only healthy participants but also participants with abnormalities besides hippocampal sclerosis in the control group. We visualized the reasons for the model prediction using the layer‐wise relevance propagation method. RESULTS: When evaluated on the validation of the training set, we achieved multiclass and binary classification accuracy of 87.5% and 88.8% from the voting ensemble of six models. Evaluated on the test sets, we achieved multiclass and binary classification accuracy of 91.5% and 89.76%. The distinctly sparse visual interpretations were provided for each individual participant and group to suggest the contribution of each input voxel to the prediction on the MRI. SIGNIFICANCE: The current interpretable deep learning‐based model is promising for adapting effectively to clinical settings by utilizing commonly used data, such as MRI, with realistic abnormalities faced by neurologists to support the diagnosis of hippocampal sclerosis with plausible visual interpretation. John Wiley and Sons Inc. 2022-10-05 /pmc/articles/PMC9712484/ /pubmed/36177546 http://dx.doi.org/10.1002/epi4.12655 Text en © 2022 The Authors. Epilepsia Open published by Wiley Periodicals LLC on behalf of International League Against Epilepsy. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Original Articles Kim, Dohyun Lee, Jungtae Moon, Jangsup Moon, Taesup Interpretable deep learning‐based hippocampal sclerosis classification |
title | Interpretable deep learning‐based hippocampal sclerosis classification |
title_full | Interpretable deep learning‐based hippocampal sclerosis classification |
title_fullStr | Interpretable deep learning‐based hippocampal sclerosis classification |
title_full_unstemmed | Interpretable deep learning‐based hippocampal sclerosis classification |
title_short | Interpretable deep learning‐based hippocampal sclerosis classification |
title_sort | interpretable deep learning‐based hippocampal sclerosis classification |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9712484/ https://www.ncbi.nlm.nih.gov/pubmed/36177546 http://dx.doi.org/10.1002/epi4.12655 |
work_keys_str_mv | AT kimdohyun interpretabledeeplearningbasedhippocampalsclerosisclassification AT leejungtae interpretabledeeplearningbasedhippocampalsclerosisclassification AT moonjangsup interpretabledeeplearningbasedhippocampalsclerosisclassification AT moontaesup interpretabledeeplearningbasedhippocampalsclerosisclassification |