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Abnormal resting-state functional connectome in methamphetamine-dependent patients and its application in machine-learning-based classification
Brain resting-state functional connectivity (rsFC) has been widely analyzed in substance use disorders (SUDs), including methamphetamine (MA) dependence. Most of these studies utilized Pearson correlation analysis to assess rsFC, which cannot determine whether two brain regions are connected by dire...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9713007/ https://www.ncbi.nlm.nih.gov/pubmed/36466158 http://dx.doi.org/10.3389/fnins.2022.1014539 |
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author | Li, Yadi Cheng, Ping Liang, Liang Dong, Haibo Liu, Huifen Shen, Wenwen Zhou, Wenhua |
author_facet | Li, Yadi Cheng, Ping Liang, Liang Dong, Haibo Liu, Huifen Shen, Wenwen Zhou, Wenhua |
author_sort | Li, Yadi |
collection | PubMed |
description | Brain resting-state functional connectivity (rsFC) has been widely analyzed in substance use disorders (SUDs), including methamphetamine (MA) dependence. Most of these studies utilized Pearson correlation analysis to assess rsFC, which cannot determine whether two brain regions are connected by direct or indirect pathways. Moreover, few studies have reported the application of rsFC-based graph theory in MA dependence. We evaluated alterations in Tikhonov regularization-based rsFC and rsFC-based topological attributes in 46 MA-dependent patients, as well as the correlations between topological attributes and clinical variables. Moreover, the topological attributes selected by least absolute shrinkage and selection operator (LASSO) were used to construct a support vector machine (SVM)-based classifier for MA dependence. The MA group presented a subnetwork with increased rsFC, indicating overactivation of the reward circuit that makes patients very sensitive to drug-related visual cues, and a subnetwork with decreased rsFC suggesting aberrant synchronized spontaneous activity in subregions within the orbitofrontal cortex (OFC) system. The MA group demonstrated a significantly decreased area under the curve (AUC) for the clustering coefficient (Cp) (P(perm) < 0.001), shortest path length (Lp) (P(perm) = 0.007), modularity (P(perm) = 0.006), and small-worldness (σ, P(perm) = 0.004), as well as an increased AUC for global efficiency (E.glob) (P(perm) = 0.009), network strength (Sp) (P(perm) = 0.009), and small-worldness (ω, P(perm) < 0.001), implying a shift toward random networks. MA-related increased nodal efficiency (E.nodal) and altered betweenness centrality were also discovered in several brain regions. The AUC for ω was significantly positively associated with psychiatric symptoms. An SVM classifier trained by 36 features selected by LASSO from all topological attributes achieved excellent performance, cross-validated prediction area under the receiver operating characteristics curve, accuracy, sensitivity, specificity, and kappa of 99.03 ± 1.79, 94.00 ± 5.78, 93.46 ± 8.82, 94.52 ± 8.11, and 87.99 ± 11.57%, respectively (P(perm) < 0.001), indicating that rsFC-based topological attributes can provide promising features for constructing a high-efficacy classifier for MA dependence. |
format | Online Article Text |
id | pubmed-9713007 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-97130072022-12-02 Abnormal resting-state functional connectome in methamphetamine-dependent patients and its application in machine-learning-based classification Li, Yadi Cheng, Ping Liang, Liang Dong, Haibo Liu, Huifen Shen, Wenwen Zhou, Wenhua Front Neurosci Neuroscience Brain resting-state functional connectivity (rsFC) has been widely analyzed in substance use disorders (SUDs), including methamphetamine (MA) dependence. Most of these studies utilized Pearson correlation analysis to assess rsFC, which cannot determine whether two brain regions are connected by direct or indirect pathways. Moreover, few studies have reported the application of rsFC-based graph theory in MA dependence. We evaluated alterations in Tikhonov regularization-based rsFC and rsFC-based topological attributes in 46 MA-dependent patients, as well as the correlations between topological attributes and clinical variables. Moreover, the topological attributes selected by least absolute shrinkage and selection operator (LASSO) were used to construct a support vector machine (SVM)-based classifier for MA dependence. The MA group presented a subnetwork with increased rsFC, indicating overactivation of the reward circuit that makes patients very sensitive to drug-related visual cues, and a subnetwork with decreased rsFC suggesting aberrant synchronized spontaneous activity in subregions within the orbitofrontal cortex (OFC) system. The MA group demonstrated a significantly decreased area under the curve (AUC) for the clustering coefficient (Cp) (P(perm) < 0.001), shortest path length (Lp) (P(perm) = 0.007), modularity (P(perm) = 0.006), and small-worldness (σ, P(perm) = 0.004), as well as an increased AUC for global efficiency (E.glob) (P(perm) = 0.009), network strength (Sp) (P(perm) = 0.009), and small-worldness (ω, P(perm) < 0.001), implying a shift toward random networks. MA-related increased nodal efficiency (E.nodal) and altered betweenness centrality were also discovered in several brain regions. The AUC for ω was significantly positively associated with psychiatric symptoms. An SVM classifier trained by 36 features selected by LASSO from all topological attributes achieved excellent performance, cross-validated prediction area under the receiver operating characteristics curve, accuracy, sensitivity, specificity, and kappa of 99.03 ± 1.79, 94.00 ± 5.78, 93.46 ± 8.82, 94.52 ± 8.11, and 87.99 ± 11.57%, respectively (P(perm) < 0.001), indicating that rsFC-based topological attributes can provide promising features for constructing a high-efficacy classifier for MA dependence. Frontiers Media S.A. 2022-11-17 /pmc/articles/PMC9713007/ /pubmed/36466158 http://dx.doi.org/10.3389/fnins.2022.1014539 Text en Copyright © 2022 Li, Cheng, Liang, Dong, Liu, Shen and Zhou. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Li, Yadi Cheng, Ping Liang, Liang Dong, Haibo Liu, Huifen Shen, Wenwen Zhou, Wenhua Abnormal resting-state functional connectome in methamphetamine-dependent patients and its application in machine-learning-based classification |
title | Abnormal resting-state functional connectome in methamphetamine-dependent patients and its application in machine-learning-based classification |
title_full | Abnormal resting-state functional connectome in methamphetamine-dependent patients and its application in machine-learning-based classification |
title_fullStr | Abnormal resting-state functional connectome in methamphetamine-dependent patients and its application in machine-learning-based classification |
title_full_unstemmed | Abnormal resting-state functional connectome in methamphetamine-dependent patients and its application in machine-learning-based classification |
title_short | Abnormal resting-state functional connectome in methamphetamine-dependent patients and its application in machine-learning-based classification |
title_sort | abnormal resting-state functional connectome in methamphetamine-dependent patients and its application in machine-learning-based classification |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9713007/ https://www.ncbi.nlm.nih.gov/pubmed/36466158 http://dx.doi.org/10.3389/fnins.2022.1014539 |
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