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OAF: a new member of the BRICHOS family

SUMMARY: The 10 known BRICHOS domain-containing proteins in humans have been linked to an unusually long list of pathologies, including cancer, obesity and two amyloid-like diseases. BRICHOS domains themselves have been described as intramolecular chaperones that act to prevent amyloid-like aggregat...

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Detalles Bibliográficos
Autores principales: Sanchez-Pulido, Luis, Ponting, Chris P
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9714404/
https://www.ncbi.nlm.nih.gov/pubmed/36699367
http://dx.doi.org/10.1093/bioadv/vbac087
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author Sanchez-Pulido, Luis
Ponting, Chris P
author_facet Sanchez-Pulido, Luis
Ponting, Chris P
author_sort Sanchez-Pulido, Luis
collection PubMed
description SUMMARY: The 10 known BRICHOS domain-containing proteins in humans have been linked to an unusually long list of pathologies, including cancer, obesity and two amyloid-like diseases. BRICHOS domains themselves have been described as intramolecular chaperones that act to prevent amyloid-like aggregation of their proteins' mature polypeptides. Using structural comparison of coevolution-based AlphaFold models and sequence conservation, we identified the Out at First (OAF) protein as a new member of the BRICHOS family in humans. OAF is an experimentally uncharacterized protein that has been proposed as a candidate biomarker for clinical management of coronavirus disease 2019 infections. Our analysis revealed how structural comparison of AlphaFold models can discover remote homology relationships and lead to a better understanding of BRICHOS domain molecular mechanism. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics Advances online.
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spelling pubmed-97144042023-01-24 OAF: a new member of the BRICHOS family Sanchez-Pulido, Luis Ponting, Chris P Bioinform Adv Discovery Note SUMMARY: The 10 known BRICHOS domain-containing proteins in humans have been linked to an unusually long list of pathologies, including cancer, obesity and two amyloid-like diseases. BRICHOS domains themselves have been described as intramolecular chaperones that act to prevent amyloid-like aggregation of their proteins' mature polypeptides. Using structural comparison of coevolution-based AlphaFold models and sequence conservation, we identified the Out at First (OAF) protein as a new member of the BRICHOS family in humans. OAF is an experimentally uncharacterized protein that has been proposed as a candidate biomarker for clinical management of coronavirus disease 2019 infections. Our analysis revealed how structural comparison of AlphaFold models can discover remote homology relationships and lead to a better understanding of BRICHOS domain molecular mechanism. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics Advances online. Oxford University Press 2022-11-24 /pmc/articles/PMC9714404/ /pubmed/36699367 http://dx.doi.org/10.1093/bioadv/vbac087 Text en © The Author(s) 2022. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Discovery Note
Sanchez-Pulido, Luis
Ponting, Chris P
OAF: a new member of the BRICHOS family
title OAF: a new member of the BRICHOS family
title_full OAF: a new member of the BRICHOS family
title_fullStr OAF: a new member of the BRICHOS family
title_full_unstemmed OAF: a new member of the BRICHOS family
title_short OAF: a new member of the BRICHOS family
title_sort oaf: a new member of the brichos family
topic Discovery Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9714404/
https://www.ncbi.nlm.nih.gov/pubmed/36699367
http://dx.doi.org/10.1093/bioadv/vbac087
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