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COVID-19 CT ground-glass opacity segmentation based on attention mechanism threshold

The ground glass opacity (GGO) of the lung is one of the essential features of COVID-19. The GGO in computed tomography (CT) images has various features and low-intensity contrast between the GGO and edge structures. These problems pose significant challenges for segmenting the GGO. To tackle these...

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Autores principales: Rao, Yunbo, Lv, Qingsong, Zeng, Shaoning, Yi, Yuling, Huang, Cheng, Gao, Yun, Cheng, Zhanglin, Sun, Jihong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9721288/
https://www.ncbi.nlm.nih.gov/pubmed/36505089
http://dx.doi.org/10.1016/j.bspc.2022.104486
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author Rao, Yunbo
Lv, Qingsong
Zeng, Shaoning
Yi, Yuling
Huang, Cheng
Gao, Yun
Cheng, Zhanglin
Sun, Jihong
author_facet Rao, Yunbo
Lv, Qingsong
Zeng, Shaoning
Yi, Yuling
Huang, Cheng
Gao, Yun
Cheng, Zhanglin
Sun, Jihong
author_sort Rao, Yunbo
collection PubMed
description The ground glass opacity (GGO) of the lung is one of the essential features of COVID-19. The GGO in computed tomography (CT) images has various features and low-intensity contrast between the GGO and edge structures. These problems pose significant challenges for segmenting the GGO. To tackle these problems, we propose a new threshold method for accurate segmentation of GGO. Specifically, we offer a framework for adjusting the threshold parameters according to the image contrast. Three functions include Attention mechanism threshold, Contour equalization, and Lung segmentation (ACL). The lung is divided into three areas using the attention mechanism threshold. Further, the segmentation parameters of the attention mechanism thresholds of the three parts are adaptively adjusted according to the image contrast. Only the segmentation regions restricted by the lung segmentation results are retained. Extensive experiments on four COVID datasets show that ACL can segment GGO images at low contrast well. Compared with the state-of-the-art methods, the similarity Dice of the ACL segmentation results is improved by 8.9%, the average symmetry surface distance ASD is reduced by 23%, and the required computational power [Formula: see text] are only 0.09% of those of deep learning models. For GGO segmentation, ACL is more lightweight, and the accuracy is higher. Code will be released at https://github.com/Lqs-github/ACL.
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spelling pubmed-97212882022-12-06 COVID-19 CT ground-glass opacity segmentation based on attention mechanism threshold Rao, Yunbo Lv, Qingsong Zeng, Shaoning Yi, Yuling Huang, Cheng Gao, Yun Cheng, Zhanglin Sun, Jihong Biomed Signal Process Control Article The ground glass opacity (GGO) of the lung is one of the essential features of COVID-19. The GGO in computed tomography (CT) images has various features and low-intensity contrast between the GGO and edge structures. These problems pose significant challenges for segmenting the GGO. To tackle these problems, we propose a new threshold method for accurate segmentation of GGO. Specifically, we offer a framework for adjusting the threshold parameters according to the image contrast. Three functions include Attention mechanism threshold, Contour equalization, and Lung segmentation (ACL). The lung is divided into three areas using the attention mechanism threshold. Further, the segmentation parameters of the attention mechanism thresholds of the three parts are adaptively adjusted according to the image contrast. Only the segmentation regions restricted by the lung segmentation results are retained. Extensive experiments on four COVID datasets show that ACL can segment GGO images at low contrast well. Compared with the state-of-the-art methods, the similarity Dice of the ACL segmentation results is improved by 8.9%, the average symmetry surface distance ASD is reduced by 23%, and the required computational power [Formula: see text] are only 0.09% of those of deep learning models. For GGO segmentation, ACL is more lightweight, and the accuracy is higher. Code will be released at https://github.com/Lqs-github/ACL. Elsevier Ltd. 2023-03 2022-12-05 /pmc/articles/PMC9721288/ /pubmed/36505089 http://dx.doi.org/10.1016/j.bspc.2022.104486 Text en © 2022 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Rao, Yunbo
Lv, Qingsong
Zeng, Shaoning
Yi, Yuling
Huang, Cheng
Gao, Yun
Cheng, Zhanglin
Sun, Jihong
COVID-19 CT ground-glass opacity segmentation based on attention mechanism threshold
title COVID-19 CT ground-glass opacity segmentation based on attention mechanism threshold
title_full COVID-19 CT ground-glass opacity segmentation based on attention mechanism threshold
title_fullStr COVID-19 CT ground-glass opacity segmentation based on attention mechanism threshold
title_full_unstemmed COVID-19 CT ground-glass opacity segmentation based on attention mechanism threshold
title_short COVID-19 CT ground-glass opacity segmentation based on attention mechanism threshold
title_sort covid-19 ct ground-glass opacity segmentation based on attention mechanism threshold
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9721288/
https://www.ncbi.nlm.nih.gov/pubmed/36505089
http://dx.doi.org/10.1016/j.bspc.2022.104486
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