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A reverse Monte Carlo algorithm to simulate two-dimensional small-angle scattering intensities
Small-angle scattering (SAS) experiments are a powerful method for studying self-assembly phenomena in nanoscopic materials because of the sensitivity of the technique to structures formed by interactions on the nanoscale. Numerous out-of-the-box options exist for analysing structures measured by SA...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9721324/ https://www.ncbi.nlm.nih.gov/pubmed/36570657 http://dx.doi.org/10.1107/S1600576722009219 |
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author | Barnsley, Lester C. Nandakumaran, Nileena Feoktystov, Artem Dulle, Martin Fruhner, Lisa Feygenson, Mikhail |
author_facet | Barnsley, Lester C. Nandakumaran, Nileena Feoktystov, Artem Dulle, Martin Fruhner, Lisa Feygenson, Mikhail |
author_sort | Barnsley, Lester C. |
collection | PubMed |
description | Small-angle scattering (SAS) experiments are a powerful method for studying self-assembly phenomena in nanoscopic materials because of the sensitivity of the technique to structures formed by interactions on the nanoscale. Numerous out-of-the-box options exist for analysing structures measured by SAS but many of these are underpinned by assumptions about the underlying interactions that are not always relevant for a given system. Here, a numerical algorithm based on reverse Monte Carlo simulations is described to model the intensity observed on a SAS detector as a function of the scattering vector. The model simulates a two-dimensional detector image, accounting for magnetic scattering, instrument resolution, particle polydispersity and particle collisions, while making no further assumptions about the underlying particle interactions. By simulating a two-dimensional image that can be potentially anisotropic, the algorithm is particularly useful for studying systems driven by anisotropic interactions. The final output of the algorithm is a relative particle distribution, allowing visualization of particle structures that form over long-range length scales (i.e. several hundred nanometres), along with an orientational distribution of magnetic moments. The effectiveness of the algorithm is shown by modelling a SAS experimental data set studying finite-length chains consisting of magnetic nanoparticles, which assembled in the presence of a strong magnetic field due to dipole interactions. |
format | Online Article Text |
id | pubmed-9721324 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-97213242022-12-22 A reverse Monte Carlo algorithm to simulate two-dimensional small-angle scattering intensities Barnsley, Lester C. Nandakumaran, Nileena Feoktystov, Artem Dulle, Martin Fruhner, Lisa Feygenson, Mikhail J Appl Crystallogr Research Papers Small-angle scattering (SAS) experiments are a powerful method for studying self-assembly phenomena in nanoscopic materials because of the sensitivity of the technique to structures formed by interactions on the nanoscale. Numerous out-of-the-box options exist for analysing structures measured by SAS but many of these are underpinned by assumptions about the underlying interactions that are not always relevant for a given system. Here, a numerical algorithm based on reverse Monte Carlo simulations is described to model the intensity observed on a SAS detector as a function of the scattering vector. The model simulates a two-dimensional detector image, accounting for magnetic scattering, instrument resolution, particle polydispersity and particle collisions, while making no further assumptions about the underlying particle interactions. By simulating a two-dimensional image that can be potentially anisotropic, the algorithm is particularly useful for studying systems driven by anisotropic interactions. The final output of the algorithm is a relative particle distribution, allowing visualization of particle structures that form over long-range length scales (i.e. several hundred nanometres), along with an orientational distribution of magnetic moments. The effectiveness of the algorithm is shown by modelling a SAS experimental data set studying finite-length chains consisting of magnetic nanoparticles, which assembled in the presence of a strong magnetic field due to dipole interactions. International Union of Crystallography 2022-11-29 /pmc/articles/PMC9721324/ /pubmed/36570657 http://dx.doi.org/10.1107/S1600576722009219 Text en © Lester C. Barnsley et al. 2022 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Papers Barnsley, Lester C. Nandakumaran, Nileena Feoktystov, Artem Dulle, Martin Fruhner, Lisa Feygenson, Mikhail A reverse Monte Carlo algorithm to simulate two-dimensional small-angle scattering intensities |
title | A reverse Monte Carlo algorithm to simulate two-dimensional small-angle scattering intensities
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title_full | A reverse Monte Carlo algorithm to simulate two-dimensional small-angle scattering intensities
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title_fullStr | A reverse Monte Carlo algorithm to simulate two-dimensional small-angle scattering intensities
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title_full_unstemmed | A reverse Monte Carlo algorithm to simulate two-dimensional small-angle scattering intensities
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title_short | A reverse Monte Carlo algorithm to simulate two-dimensional small-angle scattering intensities
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title_sort | reverse monte carlo algorithm to simulate two-dimensional small-angle scattering intensities |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9721324/ https://www.ncbi.nlm.nih.gov/pubmed/36570657 http://dx.doi.org/10.1107/S1600576722009219 |
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