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A reverse Monte Carlo algorithm to simulate two-dimensional small-angle scattering intensities

Small-angle scattering (SAS) experiments are a powerful method for studying self-assembly phenomena in nanoscopic materials because of the sensitivity of the technique to structures formed by interactions on the nanoscale. Numerous out-of-the-box options exist for analysing structures measured by SA...

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Autores principales: Barnsley, Lester C., Nandakumaran, Nileena, Feoktystov, Artem, Dulle, Martin, Fruhner, Lisa, Feygenson, Mikhail
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9721324/
https://www.ncbi.nlm.nih.gov/pubmed/36570657
http://dx.doi.org/10.1107/S1600576722009219
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author Barnsley, Lester C.
Nandakumaran, Nileena
Feoktystov, Artem
Dulle, Martin
Fruhner, Lisa
Feygenson, Mikhail
author_facet Barnsley, Lester C.
Nandakumaran, Nileena
Feoktystov, Artem
Dulle, Martin
Fruhner, Lisa
Feygenson, Mikhail
author_sort Barnsley, Lester C.
collection PubMed
description Small-angle scattering (SAS) experiments are a powerful method for studying self-assembly phenomena in nanoscopic materials because of the sensitivity of the technique to structures formed by interactions on the nanoscale. Numerous out-of-the-box options exist for analysing structures measured by SAS but many of these are underpinned by assumptions about the underlying interactions that are not always relevant for a given system. Here, a numerical algorithm based on reverse Monte Carlo simulations is described to model the intensity observed on a SAS detector as a function of the scattering vector. The model simulates a two-dimensional detector image, accounting for magnetic scattering, instrument resolution, particle polydispersity and particle collisions, while making no further assumptions about the underlying particle interactions. By simulating a two-dimensional image that can be potentially anisotropic, the algorithm is particularly useful for studying systems driven by anisotropic interactions. The final output of the algorithm is a relative particle distribution, allowing visualization of particle structures that form over long-range length scales (i.e. several hundred nanometres), along with an orientational distribution of magnetic moments. The effectiveness of the algorithm is shown by modelling a SAS experimental data set studying finite-length chains consisting of magnetic nanoparticles, which assembled in the presence of a strong magnetic field due to dipole interactions.
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spelling pubmed-97213242022-12-22 A reverse Monte Carlo algorithm to simulate two-dimensional small-angle scattering intensities Barnsley, Lester C. Nandakumaran, Nileena Feoktystov, Artem Dulle, Martin Fruhner, Lisa Feygenson, Mikhail J Appl Crystallogr Research Papers Small-angle scattering (SAS) experiments are a powerful method for studying self-assembly phenomena in nanoscopic materials because of the sensitivity of the technique to structures formed by interactions on the nanoscale. Numerous out-of-the-box options exist for analysing structures measured by SAS but many of these are underpinned by assumptions about the underlying interactions that are not always relevant for a given system. Here, a numerical algorithm based on reverse Monte Carlo simulations is described to model the intensity observed on a SAS detector as a function of the scattering vector. The model simulates a two-dimensional detector image, accounting for magnetic scattering, instrument resolution, particle polydispersity and particle collisions, while making no further assumptions about the underlying particle interactions. By simulating a two-dimensional image that can be potentially anisotropic, the algorithm is particularly useful for studying systems driven by anisotropic interactions. The final output of the algorithm is a relative particle distribution, allowing visualization of particle structures that form over long-range length scales (i.e. several hundred nanometres), along with an orientational distribution of magnetic moments. The effectiveness of the algorithm is shown by modelling a SAS experimental data set studying finite-length chains consisting of magnetic nanoparticles, which assembled in the presence of a strong magnetic field due to dipole interactions. International Union of Crystallography 2022-11-29 /pmc/articles/PMC9721324/ /pubmed/36570657 http://dx.doi.org/10.1107/S1600576722009219 Text en © Lester C. Barnsley et al. 2022 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Barnsley, Lester C.
Nandakumaran, Nileena
Feoktystov, Artem
Dulle, Martin
Fruhner, Lisa
Feygenson, Mikhail
A reverse Monte Carlo algorithm to simulate two-dimensional small-angle scattering intensities
title A reverse Monte Carlo algorithm to simulate two-dimensional small-angle scattering intensities
title_full A reverse Monte Carlo algorithm to simulate two-dimensional small-angle scattering intensities
title_fullStr A reverse Monte Carlo algorithm to simulate two-dimensional small-angle scattering intensities
title_full_unstemmed A reverse Monte Carlo algorithm to simulate two-dimensional small-angle scattering intensities
title_short A reverse Monte Carlo algorithm to simulate two-dimensional small-angle scattering intensities
title_sort reverse monte carlo algorithm to simulate two-dimensional small-angle scattering intensities
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9721324/
https://www.ncbi.nlm.nih.gov/pubmed/36570657
http://dx.doi.org/10.1107/S1600576722009219
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