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Improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method
Three-dimensional electron diffraction (3D ED) has become an effective technique to determine the structures of submicrometre- (nanometre-)sized crystals. In this work, energy-filtered 3D ED was implemented using a post-column energy filter in both STEM mode and TEM mode [(S)TEM denoting (scanning)...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9721325/ https://www.ncbi.nlm.nih.gov/pubmed/36570655 http://dx.doi.org/10.1107/S1600576722009633 |
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author | Yang, Taimin Xu, Hongyi Zou, Xiaodong |
author_facet | Yang, Taimin Xu, Hongyi Zou, Xiaodong |
author_sort | Yang, Taimin |
collection | PubMed |
description | Three-dimensional electron diffraction (3D ED) has become an effective technique to determine the structures of submicrometre- (nanometre-)sized crystals. In this work, energy-filtered 3D ED was implemented using a post-column energy filter in both STEM mode and TEM mode [(S)TEM denoting (scanning) transmission electron microscope]. The setups for performing energy-filtered 3D ED on a Gatan imaging filter are described. The technique and protocol improve the accessibility of energy-filtered 3D ED post-column energy filters, which are available in many TEM laboratories. In addition, a crystal tracking method in STEM mode using high-angle annular dark-field imaging is proposed. This method enables the user to monitor the crystal position while collecting 3D ED data at the same time, allowing a larger tilt range without foregoing any diffraction frames or imposing extra electron dose. In order to compare the differences between energy-filtered and unfiltered 3D ED data sets, three well known crystallized inorganic samples have been studied in detail. For these samples, the final R (1) values improved by 10–30% for the energy-filtered data sets compared with the unfiltered data sets, and the structures became more chemically reasonable. Possible reasons for improvement are also discussed. |
format | Online Article Text |
id | pubmed-9721325 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-97213252022-12-22 Improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method Yang, Taimin Xu, Hongyi Zou, Xiaodong J Appl Crystallogr Research Papers Three-dimensional electron diffraction (3D ED) has become an effective technique to determine the structures of submicrometre- (nanometre-)sized crystals. In this work, energy-filtered 3D ED was implemented using a post-column energy filter in both STEM mode and TEM mode [(S)TEM denoting (scanning) transmission electron microscope]. The setups for performing energy-filtered 3D ED on a Gatan imaging filter are described. The technique and protocol improve the accessibility of energy-filtered 3D ED post-column energy filters, which are available in many TEM laboratories. In addition, a crystal tracking method in STEM mode using high-angle annular dark-field imaging is proposed. This method enables the user to monitor the crystal position while collecting 3D ED data at the same time, allowing a larger tilt range without foregoing any diffraction frames or imposing extra electron dose. In order to compare the differences between energy-filtered and unfiltered 3D ED data sets, three well known crystallized inorganic samples have been studied in detail. For these samples, the final R (1) values improved by 10–30% for the energy-filtered data sets compared with the unfiltered data sets, and the structures became more chemically reasonable. Possible reasons for improvement are also discussed. International Union of Crystallography 2022-11-29 /pmc/articles/PMC9721325/ /pubmed/36570655 http://dx.doi.org/10.1107/S1600576722009633 Text en © Yang, Xu and Zou 2022 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Papers Yang, Taimin Xu, Hongyi Zou, Xiaodong Improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method |
title | Improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method |
title_full | Improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method |
title_fullStr | Improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method |
title_full_unstemmed | Improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method |
title_short | Improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method |
title_sort | improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9721325/ https://www.ncbi.nlm.nih.gov/pubmed/36570655 http://dx.doi.org/10.1107/S1600576722009633 |
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