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Improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method

Three-dimensional electron diffraction (3D ED) has become an effective technique to determine the structures of submicrometre- (nanometre-)sized crystals. In this work, energy-filtered 3D ED was implemented using a post-column energy filter in both STEM mode and TEM mode [(S)TEM denoting (scanning)...

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Autores principales: Yang, Taimin, Xu, Hongyi, Zou, Xiaodong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9721325/
https://www.ncbi.nlm.nih.gov/pubmed/36570655
http://dx.doi.org/10.1107/S1600576722009633
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author Yang, Taimin
Xu, Hongyi
Zou, Xiaodong
author_facet Yang, Taimin
Xu, Hongyi
Zou, Xiaodong
author_sort Yang, Taimin
collection PubMed
description Three-dimensional electron diffraction (3D ED) has become an effective technique to determine the structures of submicrometre- (nanometre-)sized crystals. In this work, energy-filtered 3D ED was implemented using a post-column energy filter in both STEM mode and TEM mode [(S)TEM denoting (scanning) transmission electron microscope]. The setups for performing energy-filtered 3D ED on a Gatan imaging filter are described. The technique and protocol improve the accessibility of energy-filtered 3D ED post-column energy filters, which are available in many TEM laboratories. In addition, a crystal tracking method in STEM mode using high-angle annular dark-field imaging is proposed. This method enables the user to monitor the crystal position while collecting 3D ED data at the same time, allowing a larger tilt range without foregoing any diffraction frames or imposing extra electron dose. In order to compare the differences between energy-filtered and unfiltered 3D ED data sets, three well known crystallized inorganic samples have been studied in detail. For these samples, the final R (1) values improved by 10–30% for the energy-filtered data sets compared with the unfiltered data sets, and the structures became more chemically reasonable. Possible reasons for improvement are also discussed.
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spelling pubmed-97213252022-12-22 Improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method Yang, Taimin Xu, Hongyi Zou, Xiaodong J Appl Crystallogr Research Papers Three-dimensional electron diffraction (3D ED) has become an effective technique to determine the structures of submicrometre- (nanometre-)sized crystals. In this work, energy-filtered 3D ED was implemented using a post-column energy filter in both STEM mode and TEM mode [(S)TEM denoting (scanning) transmission electron microscope]. The setups for performing energy-filtered 3D ED on a Gatan imaging filter are described. The technique and protocol improve the accessibility of energy-filtered 3D ED post-column energy filters, which are available in many TEM laboratories. In addition, a crystal tracking method in STEM mode using high-angle annular dark-field imaging is proposed. This method enables the user to monitor the crystal position while collecting 3D ED data at the same time, allowing a larger tilt range without foregoing any diffraction frames or imposing extra electron dose. In order to compare the differences between energy-filtered and unfiltered 3D ED data sets, three well known crystallized inorganic samples have been studied in detail. For these samples, the final R (1) values improved by 10–30% for the energy-filtered data sets compared with the unfiltered data sets, and the structures became more chemically reasonable. Possible reasons for improvement are also discussed. International Union of Crystallography 2022-11-29 /pmc/articles/PMC9721325/ /pubmed/36570655 http://dx.doi.org/10.1107/S1600576722009633 Text en © Yang, Xu and Zou 2022 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Yang, Taimin
Xu, Hongyi
Zou, Xiaodong
Improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method
title Improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method
title_full Improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method
title_fullStr Improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method
title_full_unstemmed Improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method
title_short Improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method
title_sort improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9721325/
https://www.ncbi.nlm.nih.gov/pubmed/36570655
http://dx.doi.org/10.1107/S1600576722009633
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