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Performance sensitivity analysis of brain metastasis stereotactic radiosurgery outcome prediction using MRI radiomics
Recent studies have used T1w contrast-enhanced (T1w-CE) magnetic resonance imaging (MRI) radiomic features and machine learning to predict post-stereotactic radiosurgery (SRS) brain metastasis (BM) progression, but have not examined the effects of combining clinical and radiomic features, BM primary...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9722896/ https://www.ncbi.nlm.nih.gov/pubmed/36471160 http://dx.doi.org/10.1038/s41598-022-25389-7 |
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author | DeVries, David A. Lagerwaard, Frank Zindler, Jaap Yeung, Timothy Pok Chi Rodrigues, George Hajdok, George Ward, Aaron D. |
author_facet | DeVries, David A. Lagerwaard, Frank Zindler, Jaap Yeung, Timothy Pok Chi Rodrigues, George Hajdok, George Ward, Aaron D. |
author_sort | DeVries, David A. |
collection | PubMed |
description | Recent studies have used T1w contrast-enhanced (T1w-CE) magnetic resonance imaging (MRI) radiomic features and machine learning to predict post-stereotactic radiosurgery (SRS) brain metastasis (BM) progression, but have not examined the effects of combining clinical and radiomic features, BM primary cancer, BM volume effects, and using multiple scanner models. To investigate these effects, a dataset of n = 123 BMs from 99 SRS patients with 12 clinical features, 107 pre-treatment T1w-CE radiomic features, and BM progression determined by follow-up MRI was used with a random decision forest model and 250 bootstrapped repetitions. Repeat experiments assessed the relative accuracy across primary cancer sites, BM volume groups, and scanner model pairings. Correction for accuracy imbalances across volume groups was investigated by removing volume-correlated features. We found that using clinical and radiomic features together produced the most accurate model with a bootstrap-corrected area under the receiver operating characteristic curve of 0.77. Accuracy also varied by primary cancer site, BM volume, and scanner model pairings. The effect of BM volume was eliminated by removing features at a volume-correlation coefficient threshold of 0.25. These results show that feature type, primary cancer, volume, and scanner model are all critical factors in the accuracy of radiomics-based prognostic models for BM SRS that must be characterised and controlled for before clinical translation. |
format | Online Article Text |
id | pubmed-9722896 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-97228962022-12-07 Performance sensitivity analysis of brain metastasis stereotactic radiosurgery outcome prediction using MRI radiomics DeVries, David A. Lagerwaard, Frank Zindler, Jaap Yeung, Timothy Pok Chi Rodrigues, George Hajdok, George Ward, Aaron D. Sci Rep Article Recent studies have used T1w contrast-enhanced (T1w-CE) magnetic resonance imaging (MRI) radiomic features and machine learning to predict post-stereotactic radiosurgery (SRS) brain metastasis (BM) progression, but have not examined the effects of combining clinical and radiomic features, BM primary cancer, BM volume effects, and using multiple scanner models. To investigate these effects, a dataset of n = 123 BMs from 99 SRS patients with 12 clinical features, 107 pre-treatment T1w-CE radiomic features, and BM progression determined by follow-up MRI was used with a random decision forest model and 250 bootstrapped repetitions. Repeat experiments assessed the relative accuracy across primary cancer sites, BM volume groups, and scanner model pairings. Correction for accuracy imbalances across volume groups was investigated by removing volume-correlated features. We found that using clinical and radiomic features together produced the most accurate model with a bootstrap-corrected area under the receiver operating characteristic curve of 0.77. Accuracy also varied by primary cancer site, BM volume, and scanner model pairings. The effect of BM volume was eliminated by removing features at a volume-correlation coefficient threshold of 0.25. These results show that feature type, primary cancer, volume, and scanner model are all critical factors in the accuracy of radiomics-based prognostic models for BM SRS that must be characterised and controlled for before clinical translation. Nature Publishing Group UK 2022-12-05 /pmc/articles/PMC9722896/ /pubmed/36471160 http://dx.doi.org/10.1038/s41598-022-25389-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article DeVries, David A. Lagerwaard, Frank Zindler, Jaap Yeung, Timothy Pok Chi Rodrigues, George Hajdok, George Ward, Aaron D. Performance sensitivity analysis of brain metastasis stereotactic radiosurgery outcome prediction using MRI radiomics |
title | Performance sensitivity analysis of brain metastasis stereotactic radiosurgery outcome prediction using MRI radiomics |
title_full | Performance sensitivity analysis of brain metastasis stereotactic radiosurgery outcome prediction using MRI radiomics |
title_fullStr | Performance sensitivity analysis of brain metastasis stereotactic radiosurgery outcome prediction using MRI radiomics |
title_full_unstemmed | Performance sensitivity analysis of brain metastasis stereotactic radiosurgery outcome prediction using MRI radiomics |
title_short | Performance sensitivity analysis of brain metastasis stereotactic radiosurgery outcome prediction using MRI radiomics |
title_sort | performance sensitivity analysis of brain metastasis stereotactic radiosurgery outcome prediction using mri radiomics |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9722896/ https://www.ncbi.nlm.nih.gov/pubmed/36471160 http://dx.doi.org/10.1038/s41598-022-25389-7 |
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